Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.33□□□□□ -0.28
PER3P56645 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 AC136475.1-202ENST00000602429 1151 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.33□□□□□ -0.28
PER3P56645 AC051619.9-201ENST00000623237 597 ntBASIC13.33□□□□□ -0.28
PER3P56645 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
PER3P56645 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.33□□□□□ -0.28
PER3P56645 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
PER3P56645 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 LILRP1-201ENST00000444199 1370 ntBASIC13.32□□□□□ -0.28
PER3P56645 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 FLJ40288-201ENST00000332558 1998 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 AC097359.2-201ENST00000604992 2389 ntBASIC13.32□□□□□ -0.28
PER3P56645 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 C2-206ENST00000442278 2434 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.32□□□□□ -0.28
PER3P56645 SEPT6-201ENST00000343984 2693 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 MST1P2-201ENST00000457982 2291 ntBASIC13.32□□□□□ -0.28
PER3P56645 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 AL591122.2-201ENST00000624125 1853 ntBASIC13.32□□□□□ -0.28
PER3P56645 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 IL20RA-207ENST00000541547 3382 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
PER3P56645 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 RPSAP31-201ENST00000416648 895 ntBASIC13.32□□□□□ -0.28
PER3P56645 AL592076.1-201ENST00000424448 303 ntBASIC13.32□□□□□ -0.28
PER3P56645 AC012441.2-201ENST00000444843 739 ntBASIC13.32□□□□□ -0.28
PER3P56645 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC13.32□□□□□ -0.28
PER3P56645 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 AC103988.2-201ENST00000561804 725 ntBASIC13.32□□□□□ -0.28
PER3P56645 AC135983.4-201ENST00000564116 1262 ntBASIC13.32□□□□□ -0.28
PER3P56645 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
PER3P56645 AF254983.2-201ENST00000612331 135 ntBASIC13.32□□□□□ -0.28
PER3P56645 AP001065.2-201ENST00000617205 644 ntBASIC13.32□□□□□ -0.28
PER3P56645 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 MPI-203ENST00000535694 1523 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 Z83844.1-201ENST00000455236 4904 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
PER3P56645 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 WASH3P-207ENST00000560956 1394 ntBASIC13.32□□□□□ -0.28
PER3P56645 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
PER3P56645 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC13.32□□□□□ -0.28
PER3P56645 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.31□□□□□ -0.28
PER3P56645 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
PER3P56645 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
PER3P56645 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC13.31□□□□□ -0.28
PER3P56645 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.31□□□□□ -0.28
PER3P56645 AC131212.3-201ENST00000624087 4219 ntBASIC13.31□□□□□ -0.28
PER3P56645 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
PER3P56645 AC015909.5-201ENST00000624336 2266 ntBASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms