Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 AC005901.1-201ENST00000592766 552 ntTSL 4 BASIC12.86□□□□□ -0.35
SUMO3P55854 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
SUMO3P55854 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
SUMO3P55854 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 GPR182-203ENST00000622922 591 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 AC079336.7-201ENST00000623428 1078 ntBASIC12.86□□□□□ -0.35
SUMO3P55854 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC12.86□□□□□ -0.35
SUMO3P55854 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC12.86□□□□□ -0.35
SUMO3P55854 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
SUMO3P55854 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 SRC-202ENST00000373558 4304 ntTSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 CMC1-204ENST00000423894 549 ntTSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 AC073150.1-201ENST00000450406 1084 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 AC008723.1-201ENST00000506922 207 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC12.85□□□□□ -0.35
SUMO3P55854 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC12.85□□□□□ -0.35
SUMO3P55854 STUB1-204ENST00000564370 875 ntTSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 MIR3619-201ENST00000579667 83 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 RN7SL455P-201ENST00000580629 282 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 NAT9-211ENST00000580632 799 ntTSL 3 BASIC12.85□□□□□ -0.35
SUMO3P55854 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.85□□□□□ -0.35
SUMO3P55854 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 AP001505.2-201ENST00000616815 443 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 AC015967.2-201ENST00000624092 234 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 AC006435.4-201ENST00000625037 234 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 AL356737.1-201ENST00000634391 234 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 AL139424.3-202ENST00000641619 917 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
SUMO3P55854 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 KRT8P31-201ENST00000504812 1408 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 AC041040.2-201ENST00000622926 2899 ntBASIC12.85□□□□□ -0.35
SUMO3P55854 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC12.85□□□□□ -0.35
SUMO3P55854 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SUMO3P55854 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
SUMO3P55854 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SUMO3P55854 AGAP10P-201ENST00000454844 2418 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 AL928654.5-201ENST00000624831 2501 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SUMO3P55854 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC12.84□□□□□ -0.35
SUMO3P55854 LINC00265-2P-201ENST00000413372 782 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 AC073869.2-201ENST00000417338 1026 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC12.84□□□□□ -0.35
SUMO3P55854 PPP1R2P4-201ENST00000424051 595 ntBASIC12.84□□□□□ -0.35
SUMO3P55854 PDIA3P2-201ENST00000428073 158 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms