Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.73■□□□□ 0.27
MRE11P49959 AL121723.1-201ENST00000445194 1519 ntBASIC16.73■□□□□ 0.27
MRE11P49959 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MRE11P49959 KCNMA1-285ENST00000640605 3864 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
MRE11P49959 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 HERPUD1-204ENST00000439977 2946 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC16.73■□□□□ 0.27
MRE11P49959 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
MRE11P49959 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 PDZRN3-208ENST00000479530 2778 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 AC093525.8-201ENST00000624099 1342 ntBASIC16.72■□□□□ 0.27
MRE11P49959 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 AC027369.3-201ENST00000530465 3707 ntBASIC16.72■□□□□ 0.27
MRE11P49959 FAM214B-208ENST00000605244 3016 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC16.72■□□□□ 0.27
MRE11P49959 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC16.72■□□□□ 0.27
MRE11P49959 MYCLP2-201ENST00000449268 967 ntBASIC16.72■□□□□ 0.27
MRE11P49959 CTBP2P5-201ENST00000454986 1264 ntBASIC16.72■□□□□ 0.27
MRE11P49959 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 KRT8P13-201ENST00000463294 1010 ntBASIC16.72■□□□□ 0.27
MRE11P49959 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.72■□□□□ 0.27
MRE11P49959 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 ZNF767P-206ENST00000513792 565 ntBASIC16.72■□□□□ 0.27
MRE11P49959 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.72■□□□□ 0.27
MRE11P49959 AP001889.1-201ENST00000525414 633 ntBASIC16.72■□□□□ 0.27
MRE11P49959 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 INO80C-210ENST00000590757 595 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC16.72■□□□□ 0.27
MRE11P49959 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 SLC7A15P-201ENST00000424028 1363 ntBASIC16.72■□□□□ 0.27
MRE11P49959 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 BCAM-211ENST00000611077 3430 ntTSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC16.72■□□□□ 0.27
MRE11P49959 SLC9A3P3-201ENST00000457608 2229 ntBASIC16.72■□□□□ 0.27
MRE11P49959 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
MRE11P49959 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
MRE11P49959 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MRE11P49959 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MRE11P49959 MIR193BHG-211ENST00000641433 5365 ntBASIC16.71■□□□□ 0.27
MRE11P49959 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 PI4KAP2-201ENST00000360806 2080 ntBASIC16.71■□□□□ 0.27
MRE11P49959 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.71■□□□□ 0.27
MRE11P49959 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
MRE11P49959 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
MRE11P49959 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 AP3M2-202ENST00000396926 3545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
MRE11P49959 USP17L7-201ENST00000530447 2022 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MRE11P49959 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 WDR66-201ENST00000288912 4467 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 AGER-203ENST00000375065 665 ntTSL 2 BASIC16.71■□□□□ 0.27
MRE11P49959 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
MRE11P49959 FAM21FP-201ENST00000426241 1131 ntBASIC16.71■□□□□ 0.27
MRE11P49959 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.71■□□□□ 0.27
MRE11P49959 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC16.71■□□□□ 0.27
MRE11P49959 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 FANCA-205ENST00000543736 1000 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
MRE11P49959 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16.71■□□□□ 0.27
MRE11P49959 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC16.71■□□□□ 0.27
MRE11P49959 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC16.71■□□□□ 0.27
MRE11P49959 RPS15-202ENST00000585665 467 ntTSL 3 BASIC16.71■□□□□ 0.27
MRE11P49959 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.71■□□□□ 0.27
MRE11P49959 AC015936.2-201ENST00000593177 259 ntBASIC16.71■□□□□ 0.27
MRE11P49959 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms