Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.92□□□□□ -0.02
SLC1A1P43005 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 AC018629.1-201ENST00000623381 1736 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
SLC1A1P43005 LINC00115-201ENST00000473798 1317 ntBASIC14.92□□□□□ -0.02
SLC1A1P43005 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 FAM24B-202ENST00000368898 745 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 CSF2RBP1-201ENST00000447905 391 ntBASIC14.91□□□□□ -0.02
SLC1A1P43005 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 SCARNA21-201ENST00000517026 139 ntBASIC14.91□□□□□ -0.02
SLC1A1P43005 ACR-203ENST00000529621 708 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 JPT2-214ENST00000569765 782 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 AL023803.2-201ENST00000620080 638 ntBASIC14.91□□□□□ -0.02
SLC1A1P43005 DDX5-235ENST00000630471 473 ntTSL 4 BASIC14.91□□□□□ -0.02
SLC1A1P43005 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 DDC-214ENST00000622873 1839 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 PPP1R11-205ENST00000376772 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC14.91□□□□□ -0.02
SLC1A1P43005 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
SLC1A1P43005 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
SLC1A1P43005 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
SLC1A1P43005 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 PSMG2-201ENST00000317615 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
SLC1A1P43005 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC14.9□□□□□ -0.02
SLC1A1P43005 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 DGCR9-201ENST00000609630 2415 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 ANKRD19P-201ENST00000338192 862 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
SLC1A1P43005 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC14.9□□□□□ -0.02
SLC1A1P43005 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
SLC1A1P43005 HLA-V-201ENST00000429037 534 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 VDAC1P1-201ENST00000439229 848 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 HSPB1P2-201ENST00000448722 546 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 GAPDHP21-201ENST00000450301 1010 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 ATP6V0CP2-201ENST00000469409 207 ntBASIC14.9□□□□□ -0.02
SLC1A1P43005 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC14.9□□□□□ -0.02
SLC1A1P43005 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC14.9□□□□□ -0.02
SLC1A1P43005 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC14.9□□□□□ -0.02
SLC1A1P43005 AC008805.1-201ENST00000590892 364 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms