Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
KDM5CP41229 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC20.6■□□□□ 0.89
KDM5CP41229 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC20.6■□□□□ 0.89
KDM5CP41229 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KDM5CP41229 EXOSC7-201ENST00000265564 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC20.59■□□□□ 0.89
KDM5CP41229 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 RFNG-202ENST00000429557 994 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.59■□□□□ 0.89
KDM5CP41229 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC20.59■□□□□ 0.89
KDM5CP41229 RN7SL478P-201ENST00000584358 298 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 AC003070.1-201ENST00000592389 457 ntTSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 AC021146.12-201ENST00000608365 477 ntTSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 AC137723.2-201ENST00000623540 398 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 AL590556.2-202ENST00000636906 844 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
KDM5CP41229 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 USP39-207ENST00000450066 2086 ntTSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 RCC2P1-201ENST00000452257 1476 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 OR7E12P-201ENST00000344740 973 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 ASS1P1-201ENST00000402854 1237 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 AC104212.2-201ENST00000478813 628 ntBASIC20.59■□□□□ 0.89
KDM5CP41229 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 DLX6-203ENST00000555308 666 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC20.59■□□□□ 0.89
KDM5CP41229 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KDM5CP41229 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC20.59■□□□□ 0.89
KDM5CP41229 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC20.59■□□□□ 0.89
KDM5CP41229 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 HLA-DMB-258ENST00000418107 1397 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
KDM5CP41229 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC20.58■□□□□ 0.89
KDM5CP41229 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
KDM5CP41229 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC20.58■□□□□ 0.89
KDM5CP41229 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC20.58■□□□□ 0.89
KDM5CP41229 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC20.58■□□□□ 0.89
KDM5CP41229 DAP3-201ENST00000343043 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 AC099063.4-201ENST00000641099 1602 ntBASIC20.58■□□□□ 0.88
KDM5CP41229 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
KDM5CP41229 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 FOLR1-204ENST00000393681 1061 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 TUBB2BP1-201ENST00000404155 871 ntBASIC20.58■□□□□ 0.88
KDM5CP41229 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
KDM5CP41229 AC005077.3-201ENST00000449614 213 ntBASIC20.58■□□□□ 0.88
KDM5CP41229 AL353653.1-201ENST00000452336 638 ntTSL 2 BASIC20.58■□□□□ 0.88
KDM5CP41229 GYG1-209ENST00000483267 801 ntTSL 2 BASIC20.58■□□□□ 0.88
KDM5CP41229 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC20.58■□□□□ 0.88
KDM5CP41229 AC092720.1-202ENST00000565824 555 ntTSL 4 BASIC20.58■□□□□ 0.88
KDM5CP41229 AC138150.1-201ENST00000589950 570 ntTSL 4 BASIC20.58■□□□□ 0.88
KDM5CP41229 BIRC5-211ENST00000592734 386 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC20.58■□□□□ 0.88
KDM5CP41229 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC20.58■□□□□ 0.88
KDM5CP41229 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KDM5CP41229 AL513477.1-201ENST00000602865 2407 ntBASIC20.57■□□□□ 0.88
KDM5CP41229 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC20.57■□□□□ 0.88
KDM5CP41229 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.57■□□□□ 0.88
KDM5CP41229 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
KDM5CP41229 TRAPPC4-214ENST00000533632 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC20.57■□□□□ 0.88
KDM5CP41229 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC20.57■□□□□ 0.88
KDM5CP41229 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KDM5CP41229 POP5-201ENST00000341039 913 ntTSL 2 BASIC20.57■□□□□ 0.88
KDM5CP41229 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms