Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CTSSP25774 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CTSSP25774 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC12.73□□□□□ -0.37
CTSSP25774 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
CTSSP25774 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC12.73□□□□□ -0.37
CTSSP25774 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
CTSSP25774 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
CTSSP25774 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
CTSSP25774 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 ELP5-203ENST00000396627 1389 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 AC005726.3-202ENST00000577814 1316 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 AC005392.1-201ENST00000419624 500 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.72□□□□□ -0.37
CTSSP25774 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 AC079112.1-201ENST00000454972 939 ntBASIC12.72□□□□□ -0.37
CTSSP25774 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 AC104784.1-201ENST00000473096 294 ntBASIC12.72□□□□□ -0.37
CTSSP25774 RN7SL81P-201ENST00000493781 261 ntBASIC12.72□□□□□ -0.37
CTSSP25774 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 FOS-204ENST00000554617 796 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.72□□□□□ -0.37
CTSSP25774 RN7SL555P-201ENST00000584742 339 ntBASIC12.72□□□□□ -0.37
CTSSP25774 MIR4522-201ENST00000584932 87 ntBASIC12.72□□□□□ -0.37
CTSSP25774 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC12.72□□□□□ -0.37
CTSSP25774 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
CTSSP25774 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC12.72□□□□□ -0.37
CTSSP25774 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 BIN3-205ENST00000519513 1431 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.71□□□□□ -0.37
CTSSP25774 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
CTSSP25774 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 OR6A2-201ENST00000332601 1373 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
CTSSP25774 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.37
CTSSP25774 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC12.71□□□□□ -0.37
CTSSP25774 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
CTSSP25774 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
CTSSP25774 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
CTSSP25774 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 52.1 ms