Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 MTND3P3-201ENST00000505004 126 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 LYRM2-204ENST00000520441 791 ntTSL 3 BASIC14.55□□□□□ -0.08
COL9A1P20849 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 AP003040.1-201ENST00000532044 1024 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC14.55□□□□□ -0.08
COL9A1P20849 EMP3-204ENST00000596315 761 ntTSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 FAM223B-202ENST00000598177 713 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 AC018695.2-201ENST00000602789 498 ntTSL 5 BASIC14.55□□□□□ -0.08
COL9A1P20849 AC010335.3-201ENST00000623767 531 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 AL138960.2-201ENST00000625145 535 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 FAM223A-202ENST00000625204 713 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 AC018529.2-202ENST00000611482 3087 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC14.55□□□□□ -0.08
COL9A1P20849 MYC-206ENST00000613283 1365 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC14.55□□□□□ -0.08
COL9A1P20849 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.55□□□□□ -0.08
COL9A1P20849 AJ011931.1-201ENST00000618749 2492 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 AL022393.1-201ENST00000625142 1677 ntBASIC14.55□□□□□ -0.08
COL9A1P20849 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
COL9A1P20849 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
COL9A1P20849 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC14.55□□□□□ -0.08
COL9A1P20849 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC14.55□□□□□ -0.08
COL9A1P20849 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
COL9A1P20849 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 NANOS3-201ENST00000339133 581 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 LINC00449-201ENST00000366259 872 ntTSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 OR8T1P-201ENST00000421347 918 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 AC073987.1-201ENST00000422683 638 ntTSL 3 BASIC14.54□□□□□ -0.08
COL9A1P20849 AL359092.2-201ENST00000423330 585 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 AP000244.1-201ENST00000424582 201 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC14.54□□□□□ -0.08
COL9A1P20849 DEFT1P-201ENST00000453425 496 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 CDHR4-205ENST00000487256 1017 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 AC079296.1-202ENST00000521394 960 ntTSL 4 BASIC14.54□□□□□ -0.08
COL9A1P20849 VENTXP3-201ENST00000546480 773 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 AC020656.1-201ENST00000548900 599 ntTSL 3 BASIC14.54□□□□□ -0.08
COL9A1P20849 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 BCAR1P1-201ENST00000553953 636 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 KRT8P1-201ENST00000557533 1207 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC14.54□□□□□ -0.08
COL9A1P20849 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC14.54□□□□□ -0.08
COL9A1P20849 AC048382.6-201ENST00000621980 1223 ntBASIC14.54□□□□□ -0.08
COL9A1P20849 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 PLSCR2-205ENST00000497985 1441 ntTSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
COL9A1P20849 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
COL9A1P20849 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC14.54□□□□□ -0.08
COL9A1P20849 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.53□□□□□ -0.08
COL9A1P20849 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
COL9A1P20849 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC14.53□□□□□ -0.08
COL9A1P20849 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14.53□□□□□ -0.08
COL9A1P20849 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC14.53□□□□□ -0.08
COL9A1P20849 COQ4-201ENST00000300452 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.53□□□□□ -0.08
COL9A1P20849 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
COL9A1P20849 HNF4A-206ENST00000457232 1339 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 NDUFB6-202ENST00000366466 761 ntTSL 2 BASIC14.53□□□□□ -0.08
COL9A1P20849 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC14.53□□□□□ -0.08
COL9A1P20849 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
COL9A1P20849 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms