Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC16.53■□□□□ 0.24
ERCC3P19447 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 RN7SL470P-201ENST00000583069 259 ntBASIC16.53■□□□□ 0.24
ERCC3P19447 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 AC005041.3-201ENST00000606287 649 ntBASIC16.53■□□□□ 0.24
ERCC3P19447 ASNSD1-206ENST00000607062 968 ntTSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ERCC3P19447 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ERCC3P19447 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
ERCC3P19447 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC3P19447 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 MX1-218ENST00000619682 1980 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 LY86-201ENST00000230568 559 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 CMTM5-201ENST00000339180 1173 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERCC3P19447 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.52■□□□□ 0.24
ERCC3P19447 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 RPL37A-203ENST00000427280 698 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.52■□□□□ 0.24
ERCC3P19447 RPL37A-206ENST00000456586 401 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 AC093627.2-201ENST00000497017 568 ntTSL 4 BASIC16.52■□□□□ 0.24
ERCC3P19447 ALG1L13P-202ENST00000519320 584 ntBASIC16.52■□□□□ 0.24
ERCC3P19447 CR383656.3-201ENST00000551315 183 ntBASIC16.52■□□□□ 0.24
ERCC3P19447 RN7SL371P-201ENST00000578099 267 ntBASIC16.52■□□□□ 0.24
ERCC3P19447 RPL37A-211ENST00000598925 775 ntTSL 5 BASIC16.52■□□□□ 0.24
ERCC3P19447 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 HIST1H2BE-201ENST00000614097 497 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ERCC3P19447 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
ERCC3P19447 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ERCC3P19447 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC16.52■□□□□ 0.23
ERCC3P19447 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC3P19447 IL9RP3-201ENST00000442856 1674 ntBASIC16.52■□□□□ 0.23
ERCC3P19447 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC3P19447 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC16.52■□□□□ 0.23
ERCC3P19447 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
ERCC3P19447 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 AC090502.4-201ENST00000551714 1386 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 ZNF174-201ENST00000268655 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 OR8T1P-201ENST00000421347 918 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 AC096649.1-201ENST00000449168 497 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC3P19447 OR2T27-202ENST00000460972 1136 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ERCC3P19447 RPL18AP8-201ENST00000486071 528 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 SNCB-203ENST00000506696 552 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ERCC3P19447 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC16.51■□□□□ 0.23
ERCC3P19447 NEU3-207ENST00000534628 746 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 AC138701.2-201ENST00000553634 226 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 AC090386.2-201ENST00000623010 1039 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ERCC3P19447 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 BRD7P5-201ENST00000299197 1822 ntBASIC16.51■□□□□ 0.23
ERCC3P19447 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ERCC3P19447 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms