Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
ATF1P18846 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ABCD1P2-201ENST00000429313 1601 ntBASIC12.56□□□□□ -0.4
ATF1P18846 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 C8B-201ENST00000371237 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ATF1P18846 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 FAM8A4P-201ENST00000435433 1213 ntBASIC12.56□□□□□ -0.4
ATF1P18846 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.56□□□□□ -0.4
ATF1P18846 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC12.56□□□□□ -0.4
ATF1P18846 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC12.56□□□□□ -0.4
ATF1P18846 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 GNRHR2-203ENST00000581100 1187 ntBASIC12.56□□□□□ -0.4
ATF1P18846 OR10B1P-201ENST00000601666 907 ntBASIC12.56□□□□□ -0.4
ATF1P18846 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
ATF1P18846 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.56□□□□□ -0.4
ATF1P18846 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
ATF1P18846 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
ATF1P18846 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 HARS-202ENST00000415192 1401 ntTSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 STAT4-202ENST00000392320 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 ACIN1-202ENST00000338631 2445 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 PTPA-215ENST00000432124 567 ntTSL 4 BASIC12.55□□□□□ -0.4
ATF1P18846 C2orf27AP3-201ENST00000434123 579 ntBASIC12.55□□□□□ -0.4
ATF1P18846 AL035414.1-201ENST00000451327 857 ntBASIC12.55□□□□□ -0.4
ATF1P18846 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC12.55□□□□□ -0.4
ATF1P18846 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 RNA5SP486-201ENST00000515961 83 ntBASIC12.55□□□□□ -0.4
ATF1P18846 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC12.55□□□□□ -0.4
ATF1P18846 AL354718.3-201ENST00000616414 581 ntBASIC12.55□□□□□ -0.4
ATF1P18846 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC12.55□□□□□ -0.4
ATF1P18846 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC12.55□□□□□ -0.4
ATF1P18846 CR382287.1-201ENST00000623954 586 ntBASIC12.55□□□□□ -0.4
ATF1P18846 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 PDIA3P1-201ENST00000471856 1510 ntBASIC12.55□□□□□ -0.4
ATF1P18846 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.55□□□□□ -0.4
ATF1P18846 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.55□□□□□ -0.4
ATF1P18846 AC115284.2-201ENST00000624646 2054 ntBASIC12.55□□□□□ -0.4
ATF1P18846 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
ATF1P18846 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 ITPRIPL1-204ENST00000439118 1946 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
ATF1P18846 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.54□□□□□ -0.4
ATF1P18846 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms