Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC11.64□□□□□ -0.55
CGB3P0DN86 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 SDCCAG3P2-201ENST00000326105 1023 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 FAM86MP-201ENST00000340703 885 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 BX679664.3-201ENST00000414070 555 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 AL008707.1-201ENST00000422498 534 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC113935.1-201ENST00000471722 555 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 AC084346.1-201ENST00000520962 528 ntTSL 4 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AP001258.2-201ENST00000529891 490 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC11.64□□□□□ -0.55
CGB3P0DN86 CMC2-204ENST00000562713 573 ntTSL 3 BASIC11.64□□□□□ -0.55
CGB3P0DN86 CMC2-209ENST00000565108 399 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC11.64□□□□□ -0.55
CGB3P0DN86 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 MIR4538-201ENST00000581377 78 ntBASIC11.64□□□□□ -0.55
CGB3P0DN86 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC11.64□□□□□ -0.55
CGB3P0DN86 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC11.64□□□□□ -0.55
CGB3P0DN86 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
CGB3P0DN86 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
CGB3P0DN86 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 AC009474.1-201ENST00000455096 1565 ntBASIC11.63□□□□□ -0.55
CGB3P0DN86 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC11.63□□□□□ -0.55
CGB3P0DN86 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC11.63□□□□□ -0.55
CGB3P0DN86 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 NFE2L1-218ENST00000583378 2051 ntTSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC11.63□□□□□ -0.55
CGB3P0DN86 AL157791.1-201ENST00000553667 1699 ntBASIC11.63□□□□□ -0.55
CGB3P0DN86 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
CGB3P0DN86 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 AC006987.1-201ENST00000413610 527 ntBASIC11.63□□□□□ -0.55
CGB3P0DN86 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC11.63□□□□□ -0.55
CGB3P0DN86 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
CGB3P0DN86 BX284668.4-201ENST00000453917 508 ntBASIC11.63□□□□□ -0.55
CGB3P0DN86 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.63□□□□□ -0.55
CGB3P0DN86 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC11.63□□□□□ -0.55
CGB3P0DN86 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC11.63□□□□□ -0.55
CGB3P0DN86 ELP5-212ENST00000574255 671 ntTSL 2 BASIC11.63□□□□□ -0.55
CGB3P0DN86 RN7SL219P-201ENST00000582872 296 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms