Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 ST8SIA1-203ENST00000396037 9714 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.8■□□□□ 0.12
TPM1P09493 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TPM1P09493 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC15.8■□□□□ 0.12
TPM1P09493 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC15.8■□□□□ 0.12
TPM1P09493 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
TPM1P09493 STK25-235ENST00000543554 2556 ntTSL 2 BASIC15.8■□□□□ 0.12
TPM1P09493 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 ITPRIP-201ENST00000278071 6807 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 TPM3P8-201ENST00000330554 643 ntBASIC15.79■□□□□ 0.12
TPM1P09493 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 AC098850.1-201ENST00000419919 790 ntBASIC15.79■□□□□ 0.12
TPM1P09493 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM1P09493 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
TPM1P09493 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC15.79■□□□□ 0.12
TPM1P09493 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
TPM1P09493 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC15.79■□□□□ 0.12
TPM1P09493 DLX4-206ENST00000611342 1662 ntBASIC15.79■□□□□ 0.12
TPM1P09493 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TPM1P09493 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 TLE3-211ENST00000557997 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CCDC18-203ENST00000401026 4552 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
TPM1P09493 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 NPNT-211ENST00000506666 2187 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 AL445209.1-201ENST00000607269 3491 ntBASIC15.78■□□□□ 0.12
TPM1P09493 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 THAP4-202ENST00000402136 785 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.78■□□□□ 0.12
TPM1P09493 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM1P09493 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM1P09493 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC15.78■□□□□ 0.12
TPM1P09493 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 AL928654.5-201ENST00000624831 2501 ntBASIC15.78■□□□□ 0.12
TPM1P09493 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.78■□□□□ 0.12
TPM1P09493 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TPM1P09493 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC15.78■□□□□ 0.12
TPM1P09493 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TPM1P09493 AC131902.2-201ENST00000566892 2172 ntBASIC15.77■□□□□ 0.12
TPM1P09493 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.77■□□□□ 0.12
TPM1P09493 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms