Protein–RNA interactions for Protein: P08F94

PKHD1, Fibrocystin, humanhuman

Predictions only

Length 4,074 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKHD1P08F94 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC8.71□□□□□ -1.02
PKHD1P08F94 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC8.71□□□□□ -1.02
PKHD1P08F94 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC8.71□□□□□ -1.02
PKHD1P08F94 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PKHD1P08F94 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC8.71□□□□□ -1.02
PKHD1P08F94 HSPA8P5-201ENST00000456928 2069 ntBASIC8.71□□□□□ -1.02
PKHD1P08F94 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC8.71□□□□□ -1.02
PKHD1P08F94 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC8.71□□□□□ -1.02
PKHD1P08F94 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC8.71□□□□□ -1.02
PKHD1P08F94 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 TPI1P3-201ENST00000335020 740 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 MRPL19-203ENST00000409374 1076 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC041040.1-201ENST00000425197 460 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 RN7SL677P-201ENST00000466970 319 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 FPGT-205ENST00000482102 561 ntTSL 4 BASIC8.7□□□□□ -1.02
PKHD1P08F94 BCAR1P1-201ENST00000553953 636 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 TNFRSF10A-204ENST00000613472 978 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 MIF4GD-214ENST00000618645 1230 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 OR2C1-201ENST00000304936 1406 ntAPPRIS P1 BASIC8.7□□□□□ -1.02
PKHD1P08F94 RSPH4A-202ENST00000368580 1410 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC103592.1-201ENST00000394513 664 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 PDLIM2-212ENST00000443561 701 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC010894.2-201ENST00000444196 561 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 PRDX2P3-201ENST00000515779 586 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC009041.1-202ENST00000599946 987 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC092687.3-201ENST00000606907 393 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC108002.3-201ENST00000612629 503 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 CA6-205ENST00000480186 1493 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 HSPA8-221ENST00000533540 1826 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 SLC26A5-201ENST00000306312 2689 ntAPPRIS P2 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC090587.1-201ENST00000415809 494 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 GAPDHP65-201ENST00000425487 1006 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 HNRNPA1P3-201ENST00000440968 551 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 AL021391.1-201ENST00000454439 545 ntTSL 4 BASIC8.7□□□□□ -1.02
PKHD1P08F94 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC027290.1-201ENST00000537827 484 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 KRT18P8-201ENST00000581937 1246 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 MED25-209ENST00000612791 881 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 KIAA0391-211ENST00000605870 1406 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 PUF60-204ENST00000456095 1736 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 USP8-219ENST00000625664 1568 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC124944.3-201ENST00000607976 1304 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 GSTM2P1-201ENST00000405166 654 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 JPT1-205ENST00000470924 663 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 TCP10L-202ENST00000472557 732 ntAPPRIS ALT2 TSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AKR1B1P3-201ENST00000525311 588 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 CCDC42-202ENST00000539522 1087 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
PKHD1P08F94 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC8.7□□□□□ -1.02
PKHD1P08F94 GABARAPL2-203ENST00000565057 571 ntTSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AL390726.3-201ENST00000567428 635 ntTSL 5 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AP001180.4-201ENST00000584167 823 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC8.7□□□□□ -1.02
PKHD1P08F94 UBA52-213ENST00000599551 707 ntAPPRIS P1 TSL 2 BASIC8.7□□□□□ -1.02
PKHD1P08F94 AC009118.3-201ENST00000622896 873 ntBASIC8.7□□□□□ -1.02
PKHD1P08F94 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
PKHD1P08F94 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms