Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 AC009474.1-201ENST00000455096 1565 ntBASIC13.16□□□□□ -0.3
THBS1P07996 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 AC092580.1-201ENST00000433998 658 ntBASIC13.16□□□□□ -0.3
THBS1P07996 Z93015.1-201ENST00000451718 390 ntBASIC13.16□□□□□ -0.3
THBS1P07996 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 RN7SL219P-201ENST00000582872 296 ntBASIC13.16□□□□□ -0.3
THBS1P07996 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC13.16□□□□□ -0.3
THBS1P07996 AL158211.2-201ENST00000607282 395 ntBASIC13.16□□□□□ -0.3
THBS1P07996 GPR182-203ENST00000622922 591 ntBASIC13.16□□□□□ -0.3
THBS1P07996 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 PP14571-202ENST00000404891 2017 ntTSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC13.16□□□□□ -0.3
THBS1P07996 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.16□□□□□ -0.3
THBS1P07996 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
THBS1P07996 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC13.15□□□□□ -0.3
THBS1P07996 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 SLC37A4-216ENST00000538950 2032 ntTSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.15□□□□□ -0.3
THBS1P07996 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC13.15□□□□□ -0.3
THBS1P07996 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 VDAC1P1-201ENST00000439229 848 ntBASIC13.15□□□□□ -0.3
THBS1P07996 AC021723.1-201ENST00000486306 515 ntBASIC13.15□□□□□ -0.3
THBS1P07996 RPSAP36-202ENST00000494591 1261 ntBASIC13.15□□□□□ -0.3
THBS1P07996 NME2-204ENST00000503064 749 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 ZNF767P-206ENST00000513792 565 ntBASIC13.15□□□□□ -0.3
THBS1P07996 SCARNA21-201ENST00000517026 139 ntBASIC13.15□□□□□ -0.3
THBS1P07996 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.15□□□□□ -0.3
THBS1P07996 FADS2-212ENST00000522639 360 ntTSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 FADS2-215ENST00000574708 385 ntTSL 3 BASIC13.15□□□□□ -0.3
THBS1P07996 AC008805.1-201ENST00000590892 364 ntBASIC13.15□□□□□ -0.3
THBS1P07996 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
THBS1P07996 AC010328.2-201ENST00000597698 1111 ntBASIC13.15□□□□□ -0.3
THBS1P07996 DDX5-235ENST00000630471 473 ntTSL 4 BASIC13.15□□□□□ -0.3
THBS1P07996 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
THBS1P07996 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC13.15□□□□□ -0.3
THBS1P07996 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
THBS1P07996 FAM90A7P-201ENST00000382628 1395 ntBASIC13.15□□□□□ -0.3
THBS1P07996 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms