Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 TTC39A-202ENST00000262676 6287 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 GOLGA8EP-201ENST00000530246 1959 ntBASIC16.06■□□□□ 0.16
TPM3P06753 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
TPM3P06753 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 ZBTB20-206ENST00000464560 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
TPM3P06753 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
TPM3P06753 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 HLA-DRB6-201ENST00000411500 1235 ntBASIC16.05■□□□□ 0.16
TPM3P06753 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.05■□□□□ 0.16
TPM3P06753 AC055876.3-201ENST00000431496 288 ntBASIC16.05■□□□□ 0.16
TPM3P06753 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 AP000347.1-202ENST00000435868 847 ntBASIC16.05■□□□□ 0.16
TPM3P06753 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM3P06753 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.05■□□□□ 0.16
TPM3P06753 AP001063.1-201ENST00000568332 529 ntBASIC16.05■□□□□ 0.16
TPM3P06753 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 AC138649.4-201ENST00000612222 287 ntBASIC16.05■□□□□ 0.16
TPM3P06753 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC16.05■□□□□ 0.16
TPM3P06753 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC16.05■□□□□ 0.16
TPM3P06753 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
TPM3P06753 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 CADM1-204ENST00000536727 3520 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TPM3P06753 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 UGT3A1-201ENST00000274278 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
TPM3P06753 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 CALY-202ENST00000368555 783 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC16.04■□□□□ 0.16
TPM3P06753 AL161932.2-201ENST00000435436 679 ntBASIC16.04■□□□□ 0.16
TPM3P06753 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC16.04■□□□□ 0.16
TPM3P06753 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 AC092552.1-201ENST00000547243 906 ntBASIC16.04■□□□□ 0.16
TPM3P06753 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.04■□□□□ 0.16
TPM3P06753 DUX4L27-201ENST00000554796 1261 ntBASIC16.04■□□□□ 0.16
TPM3P06753 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 AC005252.2-201ENST00000624630 1141 ntBASIC16.04■□□□□ 0.16
TPM3P06753 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 YWHAQ-202ENST00000381844 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 TBC1D2-204ENST00000375066 3198 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 TLK1-202ENST00000360843 5726 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 MAPK10-262ENST00000641051 5738 ntBASIC16.04■□□□□ 0.16
TPM3P06753 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 RBM15-203ENST00000602849 3368 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
TPM3P06753 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC16.04■□□□□ 0.16
TPM3P06753 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.04■□□□□ 0.16
TPM3P06753 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 PDIA3P1-201ENST00000471856 1510 ntBASIC16.04■□□□□ 0.16
TPM3P06753 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC16.04■□□□□ 0.16
TPM3P06753 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
TPM3P06753 CACNB4-210ENST00000539935 8378 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
TPM3P06753 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms