Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 GATC-203ENST00000551765 4244 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 GTF2F1-201ENST00000394456 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
CD3DP04234 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 OS9-203ENST00000389142 2457 ntTSL 5 BASIC12.13□□□□□ -0.47
CD3DP04234 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 LILRB1-203ENST00000396317 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
CD3DP04234 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC12.13□□□□□ -0.47
CD3DP04234 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 LSS-201ENST00000356396 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 LEPROTL1-201ENST00000321250 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AC009093.2-202ENST00000620513 2079 ntBASIC12.12□□□□□ -0.47
CD3DP04234 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AL023775.1-201ENST00000454907 1746 ntBASIC12.12□□□□□ -0.47
CD3DP04234 NTNG1-206ENST00000370071 3149 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 WNT9A-201ENST00000272164 3971 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC12.12□□□□□ -0.47
CD3DP04234 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 SOCS2P1-201ENST00000417727 557 ntBASIC12.12□□□□□ -0.47
CD3DP04234 TREML5P-201ENST00000421694 576 ntBASIC12.12□□□□□ -0.47
CD3DP04234 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC12.12□□□□□ -0.47
CD3DP04234 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC12.12□□□□□ -0.47
CD3DP04234 STOM-203ENST00000538954 1257 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.12□□□□□ -0.47
CD3DP04234 AC104794.3-201ENST00000566840 1248 ntBASIC12.12□□□□□ -0.47
CD3DP04234 AC010327.4-202ENST00000591484 748 ntBASIC12.12□□□□□ -0.47
CD3DP04234 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC12.12□□□□□ -0.47
CD3DP04234 AC008738.7-201ENST00000609744 511 ntBASIC12.12□□□□□ -0.47
CD3DP04234 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.12□□□□□ -0.47
CD3DP04234 AC138466.3-201ENST00000619983 221 ntBASIC12.12□□□□□ -0.47
CD3DP04234 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AL390066.1-201ENST00000456414 2302 ntTSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 SIRPA-203ENST00000400068 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 PLA1A-204ENST00000488919 1456 ntTSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 NEU3-204ENST00000531509 2468 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.12□□□□□ -0.47
CD3DP04234 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC12.12□□□□□ -0.47
CD3DP04234 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 AP000347.1-201ENST00000417194 5004 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
CD3DP04234 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC12.11□□□□□ -0.47
CD3DP04234 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 AC002350.2-201ENST00000623894 1828 ntBASIC12.11□□□□□ -0.47
CD3DP04234 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 PER1-202ENST00000354903 3115 ntTSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CD3DP04234 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 AC019205.2-203ENST00000421315 3362 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 PCID2-205ENST00000375477 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 PRKAB1-205ENST00000540121 1673 ntTSL 5 BASIC12.11□□□□□ -0.47
CD3DP04234 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC12.11□□□□□ -0.47
CD3DP04234 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC12.11□□□□□ -0.47
CD3DP04234 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC12.11□□□□□ -0.47
CD3DP04234 AC241585.1-201ENST00000433527 519 ntBASIC12.11□□□□□ -0.47
CD3DP04234 AC245100.3-201ENST00000441281 285 ntBASIC12.11□□□□□ -0.47
CD3DP04234 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.11□□□□□ -0.47
CD3DP04234 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 KRT18P25-201ENST00000508931 1278 ntBASIC12.11□□□□□ -0.47
CD3DP04234 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CD3DP04234 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC12.11□□□□□ -0.47
CD3DP04234 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.11□□□□□ -0.47
CD3DP04234 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms