Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC138894.2-201ENST00000602838 371 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 AC128714.1-201ENST00000637035 887 ntBASIC12.76□□□□□ -0.37
ZIC3O60481 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC12.76□□□□□ -0.37
ZIC3O60481 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
ZIC3O60481 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
ZIC3O60481 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
ZIC3O60481 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
ZIC3O60481 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZIC3O60481 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 SAT1-201ENST00000379251 801 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 SAT1-202ENST00000379253 909 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 SAT1-203ENST00000379254 868 ntTSL 3 BASIC12.75□□□□□ -0.37
ZIC3O60481 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
ZIC3O60481 KRT8P43-201ENST00000406052 1458 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 LINC00265-2P-201ENST00000413372 782 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 TMEM243-202ENST00000423734 601 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC12.75□□□□□ -0.37
ZIC3O60481 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 AC130709.1-201ENST00000484779 1212 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 POLD4-208ENST00000532830 904 ntTSL 3 BASIC12.75□□□□□ -0.37
ZIC3O60481 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 KLF17P1-201ENST00000547105 1126 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC12.75□□□□□ -0.37
ZIC3O60481 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 AC005632.3-201ENST00000605544 308 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC12.75□□□□□ -0.37
ZIC3O60481 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.75□□□□□ -0.37
ZIC3O60481 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.75□□□□□ -0.37
ZIC3O60481 AC006372.4-201ENST00000624122 1543 ntBASIC12.75□□□□□ -0.37
ZIC3O60481 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
ZIC3O60481 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
ZIC3O60481 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC12.75□□□□□ -0.37
ZIC3O60481 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
ZIC3O60481 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
ZIC3O60481 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.74□□□□□ -0.37
ZIC3O60481 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 AC061965.1-201ENST00000560524 1465 ntBASIC12.74□□□□□ -0.37
ZIC3O60481 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
ZIC3O60481 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
ZIC3O60481 TEKT4P2-202ENST00000559466 1312 ntBASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms