Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MPZL2-202ENST00000438295 1370 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
COL4A3BPQ9Y5P4 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 RNF8-202ENST00000373479 5631 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AL109837.1-201ENST00000603272 613 ntBASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 MIR6769A-201ENST00000617340 73 ntBASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AP002353.1-201ENST00000528257 1599 ntBASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC15.94■□□□□ 0.14
COL4A3BPQ9Y5P4 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 PTPA-217ENST00000434095 870 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC234782.1-201ENST00000451950 919 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RN7SL258P-201ENST00000478664 300 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 RHEB-207ENST00000496004 744 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AL512310.5-201ENST00000551999 515 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC079328.1-201ENST00000560358 952 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 STUB1-204ENST00000564370 875 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC006453.1-201ENST00000636037 1257 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.93■□□□□ 0.14
COL4A3BPQ9Y5P4 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.93■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms