Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
KCNIP3Q9Y2W7 TCAF2-201ENST00000357344 2958 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 DR1-202ENST00000370272 10148 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LINC02486-201ENST00000604157 3000 ntBASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 NBPF12-208ENST00000617931 7061 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 ARHGAP45-210ENST00000590214 4191 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC027237.1-201ENST00000560942 655 ntBASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC140878.1-201ENST00000565277 250 ntBASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 KIAA0319-205ENST00000543707 5314 ntAPPRIS P3 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 ERI1-209ENST00000523898 5036 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 USP20-202ENST00000358355 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
KCNIP3Q9Y2W7 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 CAMKV-201ENST00000296471 2913 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 POM121L14P-201ENST00000406100 1558 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF283-209ENST00000618787 5713 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC254562.1-201ENST00000417586 456 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ARSEP1-201ENST00000420443 635 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 KLF2P3-201ENST00000451977 1087 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 HLA-J-203ENST00000494367 1087 ntBASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.01□□□□□ -0.49
KCNIP3Q9Y2W7 AC120045.2-201ENST00000567334 178 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms