Protein–RNA interactions for Protein: Q9P0W2

HMG20B, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20BQ9P0W2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC17.29■□□□□ 0.36
HMG20BQ9P0W2 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 MRPL19-201ENST00000358788 693 ntTSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC130709.1-201ENST00000484779 1212 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 RPL18AP8-201ENST00000486071 528 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 ORAOV1P1-201ENST00000503108 395 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TPM1-223ENST00000560445 485 ntTSL 3 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AL133467.4-201ENST00000602953 725 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC087045.2-201ENST00000606279 1003 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC007881.3-201ENST00000608897 607 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 AL591122.2-201ENST00000624125 1853 ntBASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 C1R-201ENST00000535233 2211 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 USP39-220ENST00000613444 2161 ntTSL 2 BASIC17.28■□□□□ 0.36
HMG20BQ9P0W2 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 OS9-207ENST00000439210 1946 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 SHMT1P1-201ENST00000419974 1312 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 API5-208ENST00000531273 1868 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 RANBP1-201ENST00000331821 837 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 AC103592.1-201ENST00000394513 664 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 KRT18P15-201ENST00000458108 1291 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 CHCHD2P9-201ENST00000461726 456 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 AC095040.1-201ENST00000513286 675 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 POLD4-206ENST00000530584 899 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 AC009145.4-201ENST00000625119 1294 ntBASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HMG20BQ9P0W2 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.27■□□□□ 0.35
HMG20BQ9P0W2 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HMG20BQ9P0W2 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms