Protein–RNA interactions for Protein: Q9NWS1

PARPBP, PCNA-interacting partner, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PARPBPQ9NWS1 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.87□□□□□ -0.35
PARPBPQ9NWS1 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 LAP3P2-201ENST00000454686 1454 ntBASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 EIF5-202ENST00000392715 3417 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 TCF3-201ENST00000262965 4451 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 XBP1P1-201ENST00000436573 652 ntBASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PGAM1P5-201ENST00000548011 764 ntBASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC003686.1-201ENST00000550956 1034 ntBASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 NFIC-204ENST00000586919 1221 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC097359.2-201ENST00000604992 2389 ntBASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.86□□□□□ -0.35
PARPBPQ9NWS1 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AC138028.6-201ENST00000616106 1482 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 GPAA1P2-201ENST00000417923 928 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 NKAIN1P1-201ENST00000435754 582 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 SCARNA20.5-201ENST00000516991 142 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 AC009779.1-201ENST00000551138 283 ntBASIC12.85□□□□□ -0.35
PARPBPQ9NWS1 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms