Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 PCBP1-AS1-214ENST00000419542 1309 ntTSL 5 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 AC111170.3-201ENST00000624282 2464 ntBASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 RN7SL530P-201ENST00000485097 298 ntBASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RPAP1Q9BWH6 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC17.21■□□□□ 0.34
RPAP1Q9BWH6 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
RPAP1Q9BWH6 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
RPAP1Q9BWH6 CD48-201ENST00000368045 1793 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 FAM90A12P-201ENST00000519497 2375 ntBASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 FAM90A24P-201ENST00000520792 2369 ntBASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 SMIM29-202ENST00000394990 792 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 ZFAND2B-205ENST00000409319 771 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AL512306.1-201ENST00000432698 848 ntBASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 BUD31-205ENST00000456893 512 ntTSL 5 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 KRT8P1-201ENST00000557533 1207 ntBASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 NUDT4P2-201ENST00000578341 546 ntBASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 CFAP157-206ENST00000614677 1796 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 CROT-203ENST00000419147 2959 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RPAP1Q9BWH6 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 USP17L6P-201ENST00000382470 1197 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RN7SL818P-201ENST00000485099 259 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 POLD4-208ENST00000532830 904 ntTSL 3 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 RN7SL725P-201ENST00000606439 259 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AC105137.3-201ENST00000617588 984 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 AP001184.1-201ENST00000637936 376 ntBASIC17.19■□□□□ 0.34
RPAP1Q9BWH6 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms