Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 APOA1-205ENST00000375329 927 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 ACTBP8-201ENST00000403258 1108 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 TSPY16P-201ENST00000449843 468 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 ELK1P1-201ENST00000485699 580 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 WASH4P-201ENST00000564273 1246 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 RPL36-203ENST00000577222 874 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 CLUHP6-201ENST00000580789 941 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 ATF5-205ENST00000600336 682 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 AC008494.3-201ENST00000606615 944 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 GPALPP1-207ENST00000611650 899 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 CU634019.7-201ENST00000624153 1185 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 FP236241.2-201ENST00000624906 1185 ntBASIC12.73□□□□□ -0.37
RFT1Q96AA3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 USO1-201ENST00000264904 4135 ntTSL 2 BASIC12.73□□□□□ -0.37
RFT1Q96AA3 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
RFT1Q96AA3 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC020910.5-201ENST00000623668 1865 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 MRPL37P1-201ENST00000592451 1337 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ADGRD1-201ENST00000261654 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC087499.6-201ENST00000411576 835 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CTBP2P3-201ENST00000585629 1255 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 TMEM261P1-201ENST00000604899 340 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CICP1-201ENST00000416803 2410 ntBASIC12.72□□□□□ -0.37
RFT1Q96AA3 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
RFT1Q96AA3 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
RFT1Q96AA3 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
RFT1Q96AA3 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC125807.2-201ENST00000513358 3514 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 GOLGA6L10-209ENST00000621197 4160 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 AC073869.1-201ENST00000415574 2762 ntBASIC12.71□□□□□ -0.37
RFT1Q96AA3 COX6B2-210ENST00000593184 2083 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
RFT1Q96AA3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms