Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AC135782.3-201ENST00000562782 2105 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 WASH4P-201ENST00000564273 1246 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AP001063.1-201ENST00000568332 529 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 PASK-203ENST00000403638 5161 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 GLRX3-202ENST00000368644 3827 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
CCDC107Q8WV48 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AC009474.1-201ENST00000455096 1565 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 TUBB8P4-201ENST00000511806 1324 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PFKP-203ENST00000381125 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AL391647.1-201ENST00000395664 511 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 ACTBP8-201ENST00000403258 1108 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AL162726.2-201ENST00000438986 1017 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AC002472.2-201ENST00000442739 958 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 FAM207CP-201ENST00000443486 507 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 KRT18P8-201ENST00000581937 1246 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AC003102.2-201ENST00000589195 1469 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 EIF3A-201ENST00000369144 6646 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
CCDC107Q8WV48 AC011498.7-201ENST00000624986 2027 ntBASIC12.44□□□□□ -0.42
CCDC107Q8WV48 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 GOLGA8IP-202ENST00000611635 2100 ntBASIC12.43□□□□□ -0.42
CCDC107Q8WV48 CACNA1G-211ENST00000503485 6768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 ABCA3-202ENST00000382381 6446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
CCDC107Q8WV48 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.6 ms