Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
COL22A1Q8NFW1 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 UGT1A6-202ENST00000373424 1128 ntTSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC000078.1-201ENST00000420617 682 ntBASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC012100.1-201ENST00000470304 282 ntBASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC010395.2-201ENST00000509899 904 ntBASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 WISP1-205ENST00000519433 545 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AC009646.2-202ENST00000524425 826 ntTSL 3 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 WASIR2-201ENST00000527434 1054 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 OSGIN1-206ENST00000565123 833 ntTSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 MIR4459-201ENST00000581837 66 ntBASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 FES-203ENST00000394302 2133 ntTSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 OLFML1-204ENST00000530135 1620 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
COL22A1Q8NFW1 S100A6-202ENST00000368720 673 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 S100A7A-202ENST00000368728 440 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 CHCHD1-202ENST00000372837 1202 ntTSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 SERF2-205ENST00000403425 690 ntTSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 NR1I3-210ENST00000437437 973 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 AC012066.1-201ENST00000439252 694 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 PIGCP1-201ENST00000527583 895 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 MED11-203ENST00000575284 652 ntTSL 3 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 PSME3-213ENST00000592169 826 ntTSL 3 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 AC244097.1-201ENST00000621631 1216 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 CD74-201ENST00000009530 981 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 HSPA8P5-201ENST00000456928 2069 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 CICP6-201ENST00000457191 2729 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 MECR-202ENST00000373791 2416 ntTSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 GSN-215ENST00000545652 2428 ntTSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 FKBP4P1-201ENST00000507284 1347 ntBASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC18.13■□□□□ 0.49
COL22A1Q8NFW1 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 MTHFR-210ENST00000641407 2387 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL121949.1-201ENST00000402043 968 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 FAM126A-201ENST00000409763 616 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL138885.2-201ENST00000420389 539 ntTSL 3 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 SNAP25-AS1-202ENST00000426491 804 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC116347.1-201ENST00000442824 720 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 ATP5G1P7-201ENST00000444398 400 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 HNRNPA1P9-201ENST00000450624 950 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL157823.2-201ENST00000452048 669 ntTSL 3 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 VEGFA-210ENST00000457104 414 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 FPGT-205ENST00000482102 561 ntTSL 4 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC092284.1-201ENST00000511386 1289 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 VEGFA-218ENST00000518689 630 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 FAM213AP2-201ENST00000521579 683 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 VEGFA-223ENST00000523125 541 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 RPL30-213ENST00000523172 274 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC108102.1-201ENST00000606528 548 ntTSL 3 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC116036.2-201ENST00000607592 462 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AC117500.5-201ENST00000623233 527 ntBASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 RPS9-213ENST00000626547 476 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 BX088651.4-202ENST00000428895 1479 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL590399.1-202ENST00000429818 1480 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 AL512625.1-202ENST00000476224 1480 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 VOPP1-204ENST00000418904 1317 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
COL22A1Q8NFW1 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms