Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 AC015909.5-201ENST00000624336 2266 ntBASIC13.38□□□□□ -0.27
NUP43Q8NFH3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC13.38□□□□□ -0.27
NUP43Q8NFH3 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 CHIT1-201ENST00000255427 1598 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AP002353.1-201ENST00000528257 1599 ntBASIC13.37□□□□□ -0.27
NUP43Q8NFH3 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AL391119.1-201ENST00000416563 271 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AK2P2-201ENST00000439142 405 ntBASIC13.37□□□□□ -0.27
NUP43Q8NFH3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 RN7SL163P-201ENST00000583100 276 ntBASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AC005695.3-201ENST00000614522 232 ntBASIC13.37□□□□□ -0.27
NUP43Q8NFH3 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
NUP43Q8NFH3 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 MEX3B-202ENST00000558133 4333 ntBASIC13.36□□□□□ -0.27
NUP43Q8NFH3 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 CRYBG1-204ENST00000633556 9909 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 APOC3-202ENST00000375345 604 ntTSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
NUP43Q8NFH3 FOLR1-202ENST00000393676 996 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms