Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC006033.1-201ENST00000440505 426 ntBASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC244107.1-201ENST00000442033 332 ntBASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 MIR3188-201ENST00000583494 85 ntBASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AL118558.3-201ENST00000607414 1079 ntBASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SRFBP1Q8NEF9 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 USP51-201ENST00000500968 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 TSPY25P-201ENST00000429463 745 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC092580.1-201ENST00000433998 658 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC011742.3-201ENST00000439053 820 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC091804.1-201ENST00000486888 567 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC108725.1-201ENST00000495472 409 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 BAP1-211ENST00000615113 489 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AC138649.2-201ENST00000615886 705 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 AP002353.1-201ENST00000528257 1599 ntBASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC13.65□□□□□ -0.22
SRFBP1Q8NEF9 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.23
SRFBP1Q8NEF9 SHMT1P1-201ENST00000419974 1312 ntBASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 ARFGAP1-212ENST00000519604 3191 ntTSL 2 BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SRFBP1Q8NEF9 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms