Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 C20orf85-201ENST00000371168 803 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 KRT18P15-201ENST00000458108 1291 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 LYRM4-206ENST00000468929 1168 ntTSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 RN7SL530P-201ENST00000485097 298 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC090857.1-201ENST00000527400 390 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 MIR4722-201ENST00000578292 60 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC008736.2-201ENST00000587554 516 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AGAP10P-201ENST00000454844 2418 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SCUBE3Q8IX30 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SCUBE3Q8IX30 AC041040.2-201ENST00000622926 2899 ntBASIC15.03■□□□□ -0
SCUBE3Q8IX30 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 USP39-220ENST00000613444 2161 ntTSL 2 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 MFAP4-202ENST00000395592 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 AC111170.3-201ENST00000624282 2464 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 MIR769-201ENST00000390225 118 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 HINT2P1-201ENST00000419438 481 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 RPS9P1-201ENST00000419943 583 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 AL596276.2-201ENST00000447525 331 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 UPF3AP2-201ENST00000457924 1132 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 RN7SL11P-201ENST00000471305 293 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.02■□□□□ -0
SCUBE3Q8IX30 AC093752.3-201ENST00000567343 901 ntBASIC15.02■□□□□ -0
SCUBE3Q8IX30 SKA2-205ENST00000580541 689 ntTSL 3 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC15.02■□□□□ -0
SCUBE3Q8IX30 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 AL928654.5-201ENST00000624831 2501 ntBASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC15.02□□□□□ -0.01
SCUBE3Q8IX30 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 AC008132.1-202ENST00000342005 1389 ntBASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 BANP-203ENST00000393207 2438 ntTSL 2 BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SCUBE3Q8IX30 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms