Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC15.24■□□□□ 0.03
SMAD3P84022 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.24■□□□□ 0.03
SMAD3P84022 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
SMAD3P84022 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 AC104640.1-201ENST00000562617 2109 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 AC018529.2-202ENST00000611482 3087 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 AC144831.1-201ENST00000573312 2656 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD3P84022 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 AC007952.5-201ENST00000572818 1486 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD3P84022 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD3P84022 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD3P84022 MKRN3-202ENST00000564592 629 ntTSL 3 BASIC15.23■□□□□ 0.03
SMAD3P84022 ANKRD26P1-203ENST00000569528 966 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC15.23■□□□□ 0.03
SMAD3P84022 OR2T11-201ENST00000625105 1072 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
SMAD3P84022 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD3P84022 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.23■□□□□ 0.03
SMAD3P84022 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.23■□□□□ 0.03
SMAD3P84022 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
SMAD3P84022 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
SMAD3P84022 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 LAP3P2-201ENST00000454686 1454 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
SMAD3P84022 MIR600HG-201ENST00000449175 5984 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 SLC2A11-203ENST00000345044 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 ABCD1P4-201ENST00000399687 604 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 HNRNPA1P21-201ENST00000424115 961 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC15.22■□□□□ 0.03
SMAD3P84022 CIDEC-205ENST00000443115 443 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 RN7SL173P-201ENST00000461853 292 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 RN7SL578P-201ENST00000477781 283 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 AC011676.3-201ENST00000520606 294 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 C11orf45-202ENST00000524878 609 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 MIR4746-201ENST00000579802 71 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 RN7SL556P-201ENST00000582856 298 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 USP32P3-202ENST00000583574 611 ntTSL 3 BASIC15.22■□□□□ 0.03
SMAD3P84022 HPX-213ENST00000615166 826 ntTSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 AC048382.6-201ENST00000621980 1223 ntBASIC15.22■□□□□ 0.03
SMAD3P84022 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
SMAD3P84022 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
SMAD3P84022 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC15.22■□□□□ 0.03
SMAD3P84022 ANXA5-202ENST00000501272 1363 ntTSL 5 BASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms