Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRA2BP62995 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 NCR3-202ENST00000376071 541 ntTSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 BAX-205ENST00000391871 687 ntTSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 HNRNPA1P32-201ENST00000396326 963 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.42□□□□□ -0.26
TRA2BP62995 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC13.42□□□□□ -0.26
TRA2BP62995 AL008707.1-201ENST00000422498 534 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC13.42□□□□□ -0.26
TRA2BP62995 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.42□□□□□ -0.26
TRA2BP62995 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.42□□□□□ -0.26
TRA2BP62995 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 AC097103.2-206ENST00000514729 588 ntTSL 4 BASIC13.42□□□□□ -0.26
TRA2BP62995 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC13.42□□□□□ -0.26
TRA2BP62995 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC13.42□□□□□ -0.26
TRA2BP62995 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.42□□□□□ -0.26
TRA2BP62995 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 AC138649.2-201ENST00000615886 705 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 NAP1L6-202ENST00000641404 1222 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 AC126335.2-201ENST00000623362 4637 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC13.42□□□□□ -0.26
TRA2BP62995 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC13.42□□□□□ -0.26
TRA2BP62995 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.42□□□□□ -0.26
TRA2BP62995 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
TRA2BP62995 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
TRA2BP62995 AC025183.3-201ENST00000623526 1482 ntBASIC13.42□□□□□ -0.26
TRA2BP62995 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRA2BP62995 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC13.41□□□□□ -0.26
TRA2BP62995 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 LBH-202ENST00000401506 485 ntTSL 3 BASIC13.41□□□□□ -0.26
TRA2BP62995 AC006987.1-201ENST00000413610 527 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 RPS9P1-201ENST00000419943 583 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 ACTBP11-201ENST00000436287 1126 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 LILRB5-203ENST00000449561 2137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC13.41□□□□□ -0.26
TRA2BP62995 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 KRT8P1-201ENST00000557533 1207 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.41□□□□□ -0.26
TRA2BP62995 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.41□□□□□ -0.26
TRA2BP62995 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC13.41□□□□□ -0.26
TRA2BP62995 NAT9-222ENST00000583476 583 ntTSL 3 BASIC13.41□□□□□ -0.26
TRA2BP62995 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.41□□□□□ -0.26
TRA2BP62995 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 AL008721.1-201ENST00000609964 604 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
TRA2BP62995 AC100757.4-201ENST00000626934 759 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 LINC01165-201ENST00000445190 1623 ntBASIC13.41□□□□□ -0.26
TRA2BP62995 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC13.41□□□□□ -0.26
TRA2BP62995 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
TRA2BP62995 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
TRA2BP62995 SPIDR-201ENST00000297423 3988 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 71.2 ms