Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
HOXA6P31267 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXA6P31267 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 GFI1B-203ENST00000372123 1514 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXA6P31267 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 RPL10L-201ENST00000298283 812 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
HOXA6P31267 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 FRGCA-201ENST00000424933 422 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXA6P31267 AC041040.1-201ENST00000425197 460 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC13.82□□□□□ -0.2
HOXA6P31267 HNRNPA3P12-201ENST00000437410 1063 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXA6P31267 AC104212.2-201ENST00000478813 628 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 SNHG4-204ENST00000507197 865 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 AC022447.6-201ENST00000515522 438 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 AP004550.1-201ENST00000532652 514 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXA6P31267 SPAG5-AS1-204ENST00000556050 871 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC13.82□□□□□ -0.2
HOXA6P31267 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 AC016582.2-202ENST00000587765 1094 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 AL591424.3-201ENST00000614278 872 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 AC090510.3-201ENST00000615831 821 ntBASIC13.82□□□□□ -0.2
HOXA6P31267 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC13.82□□□□□ -0.2
HOXA6P31267 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
HOXA6P31267 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
HOXA6P31267 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXA6P31267 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 AC006486.2-201ENST00000624246 2199 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 NCR1-204ENST00000357397 594 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 CCL19-202ENST00000378800 414 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 SFMBT2-202ENST00000379711 692 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 SNU13-204ENST00000402458 462 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXA6P31267 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 PEBP1P3-201ENST00000455475 548 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 TPT1P11-201ENST00000458482 498 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 AC112250.1-201ENST00000504640 745 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC13.81□□□□□ -0.2
HOXA6P31267 AC011431.1-201ENST00000512971 230 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 AC004923.3-201ENST00000527532 355 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 AC004231.3-201ENST00000579136 258 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXA6P31267 AC009950.1-210ENST00000594622 553 ntTSL 3 BASIC13.81□□□□□ -0.2
HOXA6P31267 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 ING5-213ENST00000636051 4199 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
HOXA6P31267 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.81□□□□□ -0.2
HOXA6P31267 AL022313.4-201ENST00000562756 2046 ntBASIC13.81□□□□□ -0.2
HOXA6P31267 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
HOXA6P31267 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
HOXA6P31267 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms