Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 GRAPL-204ENST00000577213 866 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
COL4A5P29400 CYP1B1-AS1-204ENST00000589303 579 ntTSL 5 BASIC16.5■□□□□ 0.23
COL4A5P29400 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 HSPA7-201ENST00000445535 1927 ntBASIC16.49■□□□□ 0.23
COL4A5P29400 LINC01002-209ENST00000631858 1761 ntTSL 2 BASIC16.49■□□□□ 0.23
COL4A5P29400 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
COL4A5P29400 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.49■□□□□ 0.23
COL4A5P29400 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC16.49■□□□□ 0.23
COL4A5P29400 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC16.49■□□□□ 0.23
COL4A5P29400 RPL18AP15-201ENST00000430258 517 ntBASIC16.49■□□□□ 0.23
COL4A5P29400 C10orf90-207ENST00000480379 1012 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
COL4A5P29400 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC16.49■□□□□ 0.23
COL4A5P29400 AC015922.3-201ENST00000582780 347 ntTSL 3 BASIC16.49■□□□□ 0.23
COL4A5P29400 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
COL4A5P29400 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
COL4A5P29400 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.49■□□□□ 0.23
COL4A5P29400 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
COL4A5P29400 SFPQP1-201ENST00000446621 1786 ntBASIC16.49■□□□□ 0.23
COL4A5P29400 CNGB1-202ENST00000311183 1633 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 TMEM254-213ENST00000613758 2154 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 AC104640.1-201ENST00000562617 2109 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 AC245140.2-201ENST00000624054 1939 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 TUBB2BP1-201ENST00000404155 871 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 AC090696.1-201ENST00000419100 418 ntTSL 3 BASIC16.48■□□□□ 0.23
COL4A5P29400 AC092295.1-201ENST00000446262 434 ntTSL 3 BASIC16.48■□□□□ 0.23
COL4A5P29400 MSRB1-205ENST00000564908 550 ntTSL 3 BASIC16.48■□□□□ 0.23
COL4A5P29400 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC16.48■□□□□ 0.23
COL4A5P29400 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC16.48■□□□□ 0.23
COL4A5P29400 AL450487.2-201ENST00000615934 407 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
COL4A5P29400 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
COL4A5P29400 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
COL4A5P29400 ZNF143-202ENST00000396597 1954 ntTSL 2 BASIC16.48■□□□□ 0.23
COL4A5P29400 BX640514.1-201ENST00000583223 1918 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 AC002350.2-201ENST00000623894 1828 ntBASIC16.48■□□□□ 0.23
COL4A5P29400 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
COL4A5P29400 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 AC026786.1-201ENST00000540096 1374 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL4A5P29400 AL591499.1-201ENST00000307155 1153 ntBASIC16.47■□□□□ 0.23
COL4A5P29400 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC246787.2-202ENST00000418566 370 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 CYP4F29P-202ENST00000428301 1279 ntTSL 2 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC104115.1-201ENST00000484005 623 ntBASIC16.47■□□□□ 0.23
COL4A5P29400 TBX5-AS1-202ENST00000531024 766 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 GLT8D2-204ENST00000547583 862 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 HNRNPC-221ENST00000555883 1182 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC091132.6-201ENST00000586411 826 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 TUBB4A-207ENST00000596926 548 ntTSL 4 BASIC16.47■□□□□ 0.23
COL4A5P29400 AL137028.2-201ENST00000614601 256 ntBASIC16.47■□□□□ 0.23
COL4A5P29400 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC16.47■□□□□ 0.23
COL4A5P29400 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 ANAPC15-203ENST00000502597 1481 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 AC015802.1-201ENST00000588104 1449 ntBASIC16.47■□□□□ 0.23
COL4A5P29400 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
COL4A5P29400 CREB5-202ENST00000396298 2001 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.47■□□□□ 0.23
COL4A5P29400 GTF2A1L-201ENST00000403751 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
COL4A5P29400 AL137077.2-201ENST00000635124 1608 ntBASIC16.47■□□□□ 0.23
COL4A5P29400 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
COL4A5P29400 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms