Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CCL1P22362 RPS6KA1-213ENST00000526792 2596 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 MRPL55-214ENST00000366741 603 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 MRPL55-218ENST00000366747 603 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 MIR1909-201ENST00000411312 80 ntBASIC12.25□□□□□ -0.45
CCL1P22362 AC099336.1-201ENST00000417053 1171 ntBASIC12.25□□□□□ -0.45
CCL1P22362 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 CSF2RBP1-201ENST00000447905 391 ntBASIC12.25□□□□□ -0.45
CCL1P22362 ATP6V0CP2-201ENST00000469409 207 ntBASIC12.25□□□□□ -0.45
CCL1P22362 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SNX29P1-201ENST00000548357 1007 ntBASIC12.25□□□□□ -0.45
CCL1P22362 RAB43P1-201ENST00000561790 589 ntBASIC12.25□□□□□ -0.45
CCL1P22362 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.25□□□□□ -0.45
CCL1P22362 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 AC024075.2-201ENST00000598112 1473 ntBASIC12.25□□□□□ -0.45
CCL1P22362 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC12.25□□□□□ -0.45
CCL1P22362 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 AL445250.1-201ENST00000641671 2259 ntBASIC12.25□□□□□ -0.45
CCL1P22362 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 SDR16C5-202ENST00000396721 2399 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
CCL1P22362 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
CCL1P22362 LINC01341-202ENST00000421003 2600 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 GAPVD1-205ENST00000394084 3190 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 RBBP8NL-201ENST00000252998 2793 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
CCL1P22362 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
CCL1P22362 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL1P22362 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL1P22362 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
CCL1P22362 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL1P22362 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.24□□□□□ -0.45
CCL1P22362 AC078875.1-201ENST00000431907 724 ntBASIC12.24□□□□□ -0.45
CCL1P22362 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC12.24□□□□□ -0.45
CCL1P22362 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms