Protein–RNA interactions for Protein: P13612

ITGA4, Integrin alpha-4, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4P13612 FXNP2-201ENST00000411625 547 ntBASIC15.68■□□□□ 0.1
ITGA4P13612 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.68■□□□□ 0.1
ITGA4P13612 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC15.68■□□□□ 0.1
ITGA4P13612 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.68■□□□□ 0.1
ITGA4P13612 AC051619.9-201ENST00000623237 597 ntBASIC15.68■□□□□ 0.1
ITGA4P13612 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
ITGA4P13612 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC15.68■□□□□ 0.1
ITGA4P13612 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
ITGA4P13612 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
ITGA4P13612 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 TMEM256-201ENST00000302422 486 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 RPS2P36-201ENST00000456516 831 ntBASIC15.67■□□□□ 0.1
ITGA4P13612 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC15.67■□□□□ 0.1
ITGA4P13612 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC15.67■□□□□ 0.1
ITGA4P13612 AC140658.4-201ENST00000561990 352 ntBASIC15.67■□□□□ 0.1
ITGA4P13612 MIR4722-201ENST00000578292 60 ntBASIC15.67■□□□□ 0.1
ITGA4P13612 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.67■□□□□ 0.1
ITGA4P13612 AC103810.10-201ENST00000606504 343 ntBASIC15.67■□□□□ 0.1
ITGA4P13612 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 GPX3-201ENST00000388825 1636 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.67■□□□□ 0.1
ITGA4P13612 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.67■□□□□ 0.1
ITGA4P13612 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC15.67■□□□□ 0.1
ITGA4P13612 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
ITGA4P13612 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
ITGA4P13612 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 AC215219.1-201ENST00000400706 1817 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 DOK1-202ENST00000340004 1722 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 PEX5L-211ENST00000472994 2235 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 JTB-202ENST00000356648 1040 ntTSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
ITGA4P13612 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 AC069218.1-201ENST00000435269 762 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC15.66■□□□□ 0.1
ITGA4P13612 DUTP3-201ENST00000450025 415 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 NOC2LP1-201ENST00000450578 752 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 MPRIPP1-201ENST00000452433 1089 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
ITGA4P13612 RN7SL277P-201ENST00000481521 288 ntBASIC15.66■□□□□ 0.1
ITGA4P13612 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
ITGA4P13612 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.66■□□□□ 0.1
ITGA4P13612 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC15.66■□□□□ 0.1
ITGA4P13612 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms