Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.22□□□□□ -0.29
BMP4P12644 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC13.22□□□□□ -0.29
BMP4P12644 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
BMP4P12644 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.21□□□□□ -0.29
BMP4P12644 PTPRH-202ENST00000376350 3877 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.21□□□□□ -0.29
BMP4P12644 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC13.21□□□□□ -0.29
BMP4P12644 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.21□□□□□ -0.29
BMP4P12644 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 GAB2-202ENST00000361507 6092 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 AGAP12P-201ENST00000585227 2359 ntBASIC13.21□□□□□ -0.29
BMP4P12644 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
BMP4P12644 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
BMP4P12644 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 AL691447.1-201ENST00000419456 387 ntBASIC13.21□□□□□ -0.29
BMP4P12644 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.21□□□□□ -0.29
BMP4P12644 AC010181.2-201ENST00000483759 482 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 AC022137.2-201ENST00000503482 481 ntBASIC13.21□□□□□ -0.29
BMP4P12644 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 CLUHP6-201ENST00000580789 941 ntBASIC13.21□□□□□ -0.29
BMP4P12644 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.21□□□□□ -0.29
BMP4P12644 LARP4-220ENST00000615080 856 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 GPR39-203ENST00000622084 900 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
BMP4P12644 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.21□□□□□ -0.29
BMP4P12644 AC107375.1-201ENST00000564464 2231 ntBASIC13.21□□□□□ -0.29
BMP4P12644 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.21□□□□□ -0.3
BMP4P12644 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 LCOR-203ENST00000371097 4852 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 AL138799.1-201ENST00000448213 1675 ntBASIC13.21□□□□□ -0.3
BMP4P12644 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 STAG3-206ENST00000426455 4450 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
BMP4P12644 NHSL1-202ENST00000343505 6535 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
BMP4P12644 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
BMP4P12644 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 MIR193BHG-211ENST00000641433 5365 ntBASIC13.2□□□□□ -0.3
BMP4P12644 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.2□□□□□ -0.3
BMP4P12644 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 NOX5-202ENST00000388866 2804 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC13.2□□□□□ -0.3
BMP4P12644 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 BRWD1P1-201ENST00000401091 371 ntBASIC13.2□□□□□ -0.3
BMP4P12644 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC13.2□□□□□ -0.3
BMP4P12644 RNA5SP412-201ENST00000516234 123 ntBASIC13.2□□□□□ -0.3
BMP4P12644 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.2□□□□□ -0.3
BMP4P12644 AP000812.2-201ENST00000538934 718 ntBASIC13.2□□□□□ -0.3
BMP4P12644 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.2□□□□□ -0.3
BMP4P12644 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.2□□□□□ -0.3
BMP4P12644 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
BMP4P12644 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC13.2□□□□□ -0.3
BMP4P12644 ACTG1P22-201ENST00000603793 1099 ntBASIC13.2□□□□□ -0.3
BMP4P12644 AC005252.2-201ENST00000624630 1141 ntBASIC13.2□□□□□ -0.3
BMP4P12644 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms