Protein–RNA interactions for Protein: P09110

ACAA1, 3-ketoacyl-CoA thiolase, peroxisomal, humanhuman

Predicted RBP Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACAA1P09110 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
ACAA1P09110 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 AC016738.1-201ENST00000452364 3485 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC12.34□□□□□ -0.43
ACAA1P09110 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
ACAA1P09110 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC12.33□□□□□ -0.43
ACAA1P09110 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
ACAA1P09110 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.33□□□□□ -0.43
ACAA1P09110 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 MIR326-201ENST00000362220 95 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.33□□□□□ -0.44
ACAA1P09110 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC12.33□□□□□ -0.44
ACAA1P09110 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC12.33□□□□□ -0.44
ACAA1P09110 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC12.33□□□□□ -0.44
ACAA1P09110 RNA5SP412-201ENST00000516234 123 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 MIR4259-201ENST00000584466 101 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC12.33□□□□□ -0.44
ACAA1P09110 AC244157.2-201ENST00000616239 1006 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 SLC6A2-201ENST00000219833 2858 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 CNKSR3-204ENST00000479339 2023 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 TNN-202ENST00000621086 4234 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 TUBB8P4-201ENST00000511806 1324 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 PLSCR4-203ENST00000433593 2839 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 AC114271.1-201ENST00000612689 2813 ntBASIC12.33□□□□□ -0.44
ACAA1P09110 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
ACAA1P09110 CYB561D1-206ENST00000496961 3424 ntTSL 2 BASIC12.33□□□□□ -0.44
ACAA1P09110 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
ACAA1P09110 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
ACAA1P09110 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 LHFPL2-201ENST00000380345 5043 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.32□□□□□ -0.44
ACAA1P09110 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
ACAA1P09110 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC12.32□□□□□ -0.44
ACAA1P09110 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
ACAA1P09110 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 AC079178.1-201ENST00000420915 656 ntBASIC12.32□□□□□ -0.44
ACAA1P09110 EPDR1-203ENST00000425345 947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
ACAA1P09110 AL157407.1-201ENST00000435784 904 ntBASIC12.32□□□□□ -0.44
ACAA1P09110 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC12.32□□□□□ -0.44
ACAA1P09110 TMEM198B-204ENST00000484016 896 ntBASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms