Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 AC060814.4-201ENST00000594169 2163 ntBASIC16.07■□□□□ 0.16
TPM3P06753 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TPM3P06753 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 AC245100.3-201ENST00000441281 285 ntBASIC16.07■□□□□ 0.16
TPM3P06753 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC16.07■□□□□ 0.16
TPM3P06753 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC16.07■□□□□ 0.16
TPM3P06753 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC16.07■□□□□ 0.16
TPM3P06753 AL359711.2-201ENST00000563105 872 ntBASIC16.07■□□□□ 0.16
TPM3P06753 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.07■□□□□ 0.16
TPM3P06753 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 AC133539.2-201ENST00000604757 467 ntBASIC16.07■□□□□ 0.16
TPM3P06753 BARD1-209ENST00000613192 703 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 MVK-217ENST00000639206 367 ntTSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 PHB-210ENST00000511832 1509 ntTSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 AC008620.2-201ENST00000510294 1569 ntBASIC16.07■□□□□ 0.16
TPM3P06753 AL022313.4-201ENST00000562756 2046 ntBASIC16.07■□□□□ 0.16
TPM3P06753 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 FUBP1-203ENST00000370768 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 SERPINB1-201ENST00000380739 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 RAB37-205ENST00000392614 2704 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
TPM3P06753 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
TPM3P06753 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 AMER3-202ENST00000423981 6172 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
TPM3P06753 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TPM3P06753 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TPM3P06753 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 VENTXP1-201ENST00000569334 2716 ntBASIC16.06■□□□□ 0.16
TPM3P06753 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 RPS27L-201ENST00000330964 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 SIRT2-201ENST00000249396 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 SIRT2-204ENST00000392081 2062 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 AC115284.2-201ENST00000624646 2054 ntBASIC16.06■□□□□ 0.16
TPM3P06753 HTR3A-201ENST00000299961 1994 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 MSNP1-201ENST00000511640 1732 ntBASIC16.06■□□□□ 0.16
TPM3P06753 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16.06■□□□□ 0.16
TPM3P06753 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 CD81-207ENST00000481687 890 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 MESTP3-201ENST00000503460 968 ntBASIC16.06■□□□□ 0.16
TPM3P06753 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM3P06753 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 ENPP7P5-201ENST00000541031 1031 ntBASIC16.06■□□□□ 0.16
TPM3P06753 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.06■□□□□ 0.16
TPM3P06753 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC16.06■□□□□ 0.16
TPM3P06753 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 ABI2-202ENST00000261017 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 DYNC1I2-203ENST00000409197 2572 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 DYNC1I2-206ENST00000409773 2583 ntTSL 2 BASIC16.06■□□□□ 0.16
TPM3P06753 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
TPM3P06753 AL928654.5-201ENST00000624831 2501 ntBASIC16.06■□□□□ 0.16
TPM3P06753 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TPM3P06753 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms