Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
APPP05067 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
APPP05067 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC17.17■□□□□ 0.34
APPP05067 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
APPP05067 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 JTB-202ENST00000356648 1040 ntTSL 2 BASIC17.17■□□□□ 0.34
APPP05067 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC17.17■□□□□ 0.34
APPP05067 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC17.17■□□□□ 0.34
APPP05067 AC006335.1-201ENST00000445200 547 ntBASIC17.17■□□□□ 0.34
APPP05067 AC073150.1-201ENST00000450406 1084 ntBASIC17.17■□□□□ 0.34
APPP05067 RN7SL530P-201ENST00000485097 298 ntBASIC17.17■□□□□ 0.34
APPP05067 NUP210P1-202ENST00000504322 710 ntBASIC17.17■□□□□ 0.34
APPP05067 AC245884.6-201ENST00000515672 1067 ntBASIC17.17■□□□□ 0.34
APPP05067 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC17.17■□□□□ 0.34
APPP05067 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC17.17■□□□□ 0.34
APPP05067 NAT9-211ENST00000580632 799 ntTSL 3 BASIC17.17■□□□□ 0.34
APPP05067 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 IRF3-215ENST00000596822 823 ntTSL 3 BASIC17.17■□□□□ 0.34
APPP05067 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
APPP05067 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
APPP05067 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APPP05067 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC17.17■□□□□ 0.34
APPP05067 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
APPP05067 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
APPP05067 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
APPP05067 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 GOLGA8DP-202ENST00000341390 2184 ntBASIC17.16■□□□□ 0.34
APPP05067 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC17.16■□□□□ 0.34
APPP05067 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 MUTYH-210ENST00000450313 1929 ntTSL 5 BASIC17.16■□□□□ 0.34
APPP05067 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC17.16■□□□□ 0.34
APPP05067 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC17.16■□□□□ 0.34
APPP05067 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 RHEB-207ENST00000496004 744 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC17.16■□□□□ 0.34
APPP05067 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC17.16■□□□□ 0.34
APPP05067 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC17.16■□□□□ 0.34
APPP05067 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
APPP05067 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
APPP05067 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC17.16■□□□□ 0.34
APPP05067 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
APPP05067 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
APPP05067 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC17.15■□□□□ 0.34
APPP05067 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC17.15■□□□□ 0.34
APPP05067 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC17.15■□□□□ 0.34
APPP05067 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC17.15■□□□□ 0.34
APPP05067 TARDBP-201ENST00000240185 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC17.15■□□□□ 0.34
APPP05067 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
APPP05067 FOXP4-AS1-203ENST00000439386 404 ntTSL 3 BASIC17.15■□□□□ 0.34
APPP05067 DUX4L50-201ENST00000455245 715 ntBASIC17.15■□□□□ 0.34
APPP05067 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APPP05067 AC015660.1-201ENST00000560103 395 ntTSL 3 BASIC17.15■□□□□ 0.34
APPP05067 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms