Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 HPD-204ENST00000543163 1709 ntTSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
GAPDHP04406 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC12.03□□□□□ -0.48
GAPDHP04406 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.03□□□□□ -0.48
GAPDHP04406 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 FAM189A2-204ENST00000455972 2107 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
GAPDHP04406 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
GAPDHP04406 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 C1QTNF1-203ENST00000354124 2714 ntAPPRIS P1 TSL 4 BASIC12.02□□□□□ -0.49
GAPDHP04406 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 AC112492.5-201ENST00000421897 457 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.02□□□□□ -0.49
GAPDHP04406 CROCCP4-201ENST00000457096 498 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 GPR53P-205ENST00000457298 1084 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 NAA50-208ENST00000497255 789 ntTSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.02□□□□□ -0.49
GAPDHP04406 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 AL512343.1-201ENST00000605837 169 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 ZACNP1-201ENST00000612259 710 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 AC002472.3-201ENST00000640124 621 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 HSPA8P5-201ENST00000456928 2069 ntBASIC12.02□□□□□ -0.49
GAPDHP04406 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.02□□□□□ -0.49
GAPDHP04406 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC12.02□□□□□ -0.49
GAPDHP04406 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
GAPDHP04406 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC12.01□□□□□ -0.49
GAPDHP04406 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC12.01□□□□□ -0.49
GAPDHP04406 NLRP7-207ENST00000590030 3209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 Z98257.2-202ENST00000641138 1548 ntBASIC12.01□□□□□ -0.49
GAPDHP04406 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.01□□□□□ -0.49
GAPDHP04406 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.01□□□□□ -0.49
GAPDHP04406 AC011498.7-201ENST00000624986 2027 ntBASIC12.01□□□□□ -0.49
GAPDHP04406 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
GAPDHP04406 AC015688.4-201ENST00000580780 1647 ntBASIC12.01□□□□□ -0.49
GAPDHP04406 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 WIZ-202ENST00000389282 4067 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC12.01□□□□□ -0.49
GAPDHP04406 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
GAPDHP04406 PRRT3-203ENST00000412055 3761 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
GAPDHP04406 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
GAPDHP04406 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC12.01□□□□□ -0.49
GAPDHP04406 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
GAPDHP04406 PUDPP3-201ENST00000445368 636 ntBASIC12.01□□□□□ -0.49
GAPDHP04406 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC12.01□□□□□ -0.49
GAPDHP04406 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms