Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 AL731571.1-201ENST00000617058 5428 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
MT-ND1P03886 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 AL161932.2-201ENST00000435436 679 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC13.53□□□□□ -0.24
MT-ND1P03886 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC13.53□□□□□ -0.24
MT-ND1P03886 AC009486.1-201ENST00000569860 813 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 AC027796.2-201ENST00000575326 344 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 CTBP2P3-201ENST00000585629 1255 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 KRT8P28-201ENST00000433288 1390 ntBASIC13.53□□□□□ -0.24
MT-ND1P03886 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC13.53□□□□□ -0.24
MT-ND1P03886 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.53□□□□□ -0.24
MT-ND1P03886 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 HOXC4-202ENST00000430889 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC13.53□□□□□ -0.24
MT-ND1P03886 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC13.53□□□□□ -0.24
MT-ND1P03886 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
MT-ND1P03886 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.52□□□□□ -0.24
MT-ND1P03886 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 EPB42-210ENST00000622454 2227 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 AP003969.2-201ENST00000623739 2275 ntBASIC13.52□□□□□ -0.24
MT-ND1P03886 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
MT-ND1P03886 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
MT-ND1P03886 AC244453.2-201ENST00000457996 3543 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 USP17L6P-201ENST00000382470 1197 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 AC093433.1-201ENST00000458048 571 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
MT-ND1P03886 AL391280.1-201ENST00000506969 1062 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC13.52□□□□□ -0.25
MT-ND1P03886 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.52□□□□□ -0.25
MT-ND1P03886 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC13.52□□□□□ -0.25
MT-ND1P03886 AC008494.3-201ENST00000606615 944 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 WFDC1-204ENST00000613603 549 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.52□□□□□ -0.25
MT-ND1P03886 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 NBAT1-201ENST00000566912 1940 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC13.52□□□□□ -0.25
MT-ND1P03886 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 PJA1-203ENST00000374583 2692 ntAPPRIS P4 BASIC13.52□□□□□ -0.25
MT-ND1P03886 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC13.52□□□□□ -0.25
MT-ND1P03886 RASA4CP-203ENST00000446874 3193 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 AC022497.1-201ENST00000624916 3691 ntBASIC13.52□□□□□ -0.25
MT-ND1P03886 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 NCS1-201ENST00000372398 4991 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
MT-ND1P03886 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC13.51□□□□□ -0.25
MT-ND1P03886 NCDN-201ENST00000356090 3433 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
MT-ND1P03886 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC13.51□□□□□ -0.25
MT-ND1P03886 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms