Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 TMBIM6-203ENST00000423828 3254 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
KRT6AP02538 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
KRT6AP02538 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 LGALS12-204ENST00000415491 1816 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 ZNF460-202ENST00000537645 2037 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 STRCP1-201ENST00000509801 5328 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 RPL14-202ENST00000396203 916 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.9□□□□□ -0.18
KRT6AP02538 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.9□□□□□ -0.18
KRT6AP02538 AC079178.1-201ENST00000420915 656 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 AC234783.1-201ENST00000441761 496 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 CROCCP4-201ENST00000457096 498 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 AC100850.1-201ENST00000506768 649 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.9□□□□□ -0.18
KRT6AP02538 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 AC009955.4-201ENST00000597192 544 ntBASIC13.9□□□□□ -0.18
KRT6AP02538 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC13.9□□□□□ -0.18
KRT6AP02538 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
KRT6AP02538 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC13.9□□□□□ -0.18
KRT6AP02538 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.9□□□□□ -0.18
KRT6AP02538 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
KRT6AP02538 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.9□□□□□ -0.19
KRT6AP02538 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
KRT6AP02538 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
KRT6AP02538 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
KRT6AP02538 OCRL-201ENST00000357121 5138 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 SLC46A1-208ENST00000618626 5363 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 FP325330.2-201ENST00000624219 5630 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 AK2P2-201ENST00000439142 405 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 AC012441.2-201ENST00000444843 739 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.89□□□□□ -0.19
KRT6AP02538 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC13.89□□□□□ -0.19
KRT6AP02538 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
KRT6AP02538 AC100827.2-201ENST00000563214 1194 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 AC106886.1-201ENST00000568660 600 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
KRT6AP02538 AC244157.2-201ENST00000616239 1006 ntBASIC13.89□□□□□ -0.19
KRT6AP02538 EPB41L1-202ENST00000338074 6266 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 90.3 ms