Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
PDGFBP01127 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
PDGFBP01127 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.1□□□□□ -0.15
PDGFBP01127 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 DBET-201ENST00000630918 3363 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PDGFBP01127 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC14.09□□□□□ -0.15
PDGFBP01127 AC011239.1-201ENST00000430988 584 ntTSL 4 BASIC14.09□□□□□ -0.15
PDGFBP01127 PGK1P2-201ENST00000431702 1214 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 EEF1DP2-201ENST00000433698 843 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC14.09□□□□□ -0.15
PDGFBP01127 MARK2P17-201ENST00000498560 841 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 CCNL2P1-201ENST00000512846 969 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 AL157871.1-201ENST00000555428 429 ntTSL 3 BASIC14.09□□□□□ -0.15
PDGFBP01127 GRAMD4P6-201ENST00000556999 244 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 LINC00969-241ENST00000600527 852 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 ZNF677-210ENST00000601413 706 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 OR3A1-202ENST00000615105 966 ntBASIC14.09□□□□□ -0.15
PDGFBP01127 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 OSCP1-201ENST00000235532 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 OSCP1-203ENST00000356637 1463 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 EML1-203ENST00000334192 4064 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 CLUL1-202ENST00000400606 1943 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 FGF21-202ENST00000593756 1312 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
PDGFBP01127 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 PGR-210ENST00000619228 3038 ntTSL 5 BASIC14.09□□□□□ -0.15
PDGFBP01127 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.09□□□□□ -0.15
PDGFBP01127 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
PDGFBP01127 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
PDGFBP01127 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.08□□□□□ -0.15
PDGFBP01127 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.08□□□□□ -0.15
PDGFBP01127 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
PDGFBP01127 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 RHD-209ENST00000568195 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC14.08□□□□□ -0.16
PDGFBP01127 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 GZMB-201ENST00000216341 968 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 LINC02449-201ENST00000304751 795 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 NR2C2AP-201ENST00000331552 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 AC131011.1-201ENST00000366134 672 ntTSL 3 BASIC14.08□□□□□ -0.16
PDGFBP01127 NR1I3-201ENST00000367979 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 NR1I3-207ENST00000367985 1074 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 ASS1P1-201ENST00000402854 1237 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 PHBP10-201ENST00000416467 784 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 NR2C2AP-202ENST00000420605 859 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 LINC01824-201ENST00000436082 528 ntTSL 4 BASIC14.08□□□□□ -0.16
PDGFBP01127 YY1P2-201ENST00000438766 948 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 KCNC4-AS1-201ENST00000455967 748 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 RN7SL69P-201ENST00000468423 272 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 RPL29P2-201ENST00000488409 460 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 AC093700.1-201ENST00000503348 717 ntBASIC14.08□□□□□ -0.16
PDGFBP01127 TMA16-204ENST00000508268 608 ntTSL 2 BASIC14.08□□□□□ -0.16
PDGFBP01127 NR1I3-225ENST00000508387 634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
PDGFBP01127 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms