Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC15.08■□□□□ 0
TIMP1P01033 AC022098.2-201ENST00000590528 518 ntTSL 4 BASIC15.08■□□□□ 0
TIMP1P01033 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC15.08■□□□□ 0
TIMP1P01033 BX322562.1-201ENST00000617004 561 ntBASIC15.08■□□□□ 0
TIMP1P01033 AC005609.5-201ENST00000624712 1053 ntTSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TIMP1P01033 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 DDX19B-213ENST00000568625 1681 ntTSL 2 BASIC15.08■□□□□ 0
TIMP1P01033 LYPLA1-202ENST00000343231 1308 ntTSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 SULT1A1-203ENST00000395607 1386 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TIMP1P01033 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC15.08■□□□□ 0
TIMP1P01033 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.08■□□□□ 0
TIMP1P01033 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TIMP1P01033 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TIMP1P01033 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0
TIMP1P01033 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 AC103702.1-201ENST00000548801 2630 ntBASIC15.07■□□□□ 0
TIMP1P01033 TFG-208ENST00000490574 1696 ntAPPRIS P3 TSL 3 BASIC15.07■□□□□ 0
TIMP1P01033 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 S100B-201ENST00000291700 877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 CD37-203ENST00000426897 1204 ntTSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 CUTA-204ENST00000440279 822 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC15.07■□□□□ 0
TIMP1P01033 PSME2P2-201ENST00000453033 700 ntBASIC15.07■□□□□ 0
TIMP1P01033 CDK7-211ENST00000514676 1164 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 AP003043.1-201ENST00000527804 547 ntTSL 4 BASIC15.07■□□□□ 0
TIMP1P01033 AC142086.5-202ENST00000562500 217 ntBASIC15.07■□□□□ 0
TIMP1P01033 ACTBP9-201ENST00000587663 1099 ntBASIC15.07■□□□□ 0
TIMP1P01033 AL080250.1-203ENST00000607799 747 ntTSL 2 BASIC15.07■□□□□ 0
TIMP1P01033 AC123912.6-201ENST00000612657 315 ntBASIC15.07■□□□□ 0
TIMP1P01033 AC009041.4-201ENST00000620075 638 ntBASIC15.07■□□□□ 0
TIMP1P01033 AL499606.1-201ENST00000627866 413 ntTSL 3 BASIC15.07■□□□□ 0
TIMP1P01033 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 BPIFB6-201ENST00000349552 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 AL121753.2-201ENST00000624581 1461 ntBASIC15.07■□□□□ 0
TIMP1P01033 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC15.07■□□□□ 0
TIMP1P01033 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TIMP1P01033 AC006486.2-201ENST00000624246 2199 ntBASIC15.07■□□□□ 0
TIMP1P01033 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC15.06■□□□□ 0
TIMP1P01033 RN7SL832P-201ENST00000607781 1756 ntBASIC15.06■□□□□ 0
TIMP1P01033 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
TIMP1P01033 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
TIMP1P01033 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC15.06■□□□□ 0
TIMP1P01033 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC15.06■□□□□ 0
TIMP1P01033 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 MANEA-202ENST00000369293 1076 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 CASP8-206ENST00000392258 1060 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 CD79B-203ENST00000392795 1254 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 U73169.1-201ENST00000395152 367 ntBASIC15.06■□□□□ 0
TIMP1P01033 PLA2G15-203ENST00000444212 943 ntTSL 2 BASIC15.06■□□□□ 0
TIMP1P01033 RN7SL838P-201ENST00000481676 295 ntBASIC15.06■□□□□ 0
TIMP1P01033 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC15.06■□□□□ 0
TIMP1P01033 MARK2P17-201ENST00000498560 841 ntBASIC15.06■□□□□ 0
TIMP1P01033 AC093700.1-201ENST00000503348 717 ntBASIC15.06■□□□□ 0
TIMP1P01033 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC15.06■□□□□ 0
TIMP1P01033 RNA5SP420-201ENST00000516997 137 ntBASIC15.06■□□□□ 0
TIMP1P01033 IGHVII-74-1-201ENST00000517572 241 ntBASIC15.06■□□□□ 0
TIMP1P01033 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC15.06■□□□□ 0
TIMP1P01033 PHBP18-201ENST00000546648 813 ntBASIC15.06■□□□□ 0
TIMP1P01033 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC15.06■□□□□ 0
TIMP1P01033 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC15.06■□□□□ 0
TIMP1P01033 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC15.06■□□□□ 0
TIMP1P01033 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC15.06■□□□□ 0
TIMP1P01033 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC15.06■□□□□ 0
TIMP1P01033 AC092327.2-201ENST00000595705 901 ntTSL 3 BASIC15.06■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms