Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC15.23■□□□□ 0.03
O00370 AC011742.3-201ENST00000439053 820 ntBASIC15.23■□□□□ 0.03
O00370 TMEM198B-204ENST00000484016 896 ntBASIC15.23■□□□□ 0.03
O00370 SDHD-202ENST00000525291 790 ntTSL 3 BASIC15.23■□□□□ 0.03
O00370 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 MIR3615-201ENST00000581999 87 ntBASIC15.23■□□□□ 0.03
O00370 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC15.23■□□□□ 0.03
O00370 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC15.23■□□□□ 0.03
O00370 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
O00370 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 AL805961.1-203ENST00000641078 1258 ntBASIC15.23■□□□□ 0.03
O00370 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC15.23■□□□□ 0.03
O00370 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
O00370 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
O00370 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC15.23■□□□□ 0.03
O00370 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
O00370 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
O00370 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 KRT8P21-201ENST00000430398 1491 ntBASIC15.22■□□□□ 0.03
O00370 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 FERMT1-201ENST00000217289 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
O00370 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
O00370 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 AKR7A2P1-201ENST00000460134 915 ntBASIC15.22■□□□□ 0.03
O00370 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC15.22■□□□□ 0.03
O00370 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC15.22■□□□□ 0.03
O00370 AC244093.1-201ENST00000610837 814 ntBASIC15.22■□□□□ 0.03
O00370 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
O00370 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 TCAF2-202ENST00000411935 2906 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC15.22■□□□□ 0.03
O00370 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
O00370 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 OLFML3-203ENST00000393300 1961 ntTSL 3 BASIC15.22■□□□□ 0.03
O00370 TGOLN2-204ENST00000409015 2276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 NUTM2G-201ENST00000354649 2851 ntAPPRIS P3 TSL 5 BASIC15.22■□□□□ 0.03
O00370 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.22■□□□□ 0.03
O00370 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
O00370 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
O00370 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
O00370 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
O00370 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
O00370 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
O00370 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC15.21■□□□□ 0.03
O00370 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC15.21■□□□□ 0.03
O00370 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC15.21■□□□□ 0.03
O00370 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
O00370 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
O00370 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 FNTAP2-201ENST00000430308 634 ntBASIC15.21■□□□□ 0.03
O00370 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC15.21■□□□□ 0.03
O00370 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC15.21■□□□□ 0.03
O00370 PENK-202ENST00000451791 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
O00370 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.21■□□□□ 0.03
O00370 HIST2H2BC-201ENST00000498492 580 ntBASIC15.21■□□□□ 0.03
O00370 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms