Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 ARRB2-203ENST00000381488 1236 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AC005740.2-201ENST00000511085 419 ntBASIC14.37□□□□□ -0.11
CFAP99D6REC4 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AC104506.1-201ENST00000609247 429 ntBASIC14.37□□□□□ -0.11
CFAP99D6REC4 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AL109620.1-201ENST00000618738 1197 ntBASIC14.37□□□□□ -0.11
CFAP99D6REC4 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AC152010.1-201ENST00000415779 2006 ntBASIC14.37□□□□□ -0.11
CFAP99D6REC4 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 EP400NL-206ENST00000446190 3697 ntTSL 2 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AHCYP4-201ENST00000419201 1315 ntBASIC14.37□□□□□ -0.11
CFAP99D6REC4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC14.37□□□□□ -0.11
CFAP99D6REC4 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CFAP99D6REC4 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC004898.1-201ENST00000451057 766 ntBASIC14.36□□□□□ -0.11
CFAP99D6REC4 SERPINA13P-202ENST00000478994 924 ntBASIC14.36□□□□□ -0.11
CFAP99D6REC4 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 EID1-202ENST00000560490 584 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC079414.2-201ENST00000567157 1104 ntBASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC124068.2-201ENST00000569473 1109 ntBASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC087289.4-201ENST00000587348 230 ntTSL 3 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 AC022960.2-201ENST00000616300 666 ntBASIC14.36□□□□□ -0.11
CFAP99D6REC4 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CFAP99D6REC4 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CFAP99D6REC4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms