Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CD248Q9HCU0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CD248Q9HCU0 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 USP4-203ENST00000415188 1454 ntTSL 3 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 NFATC1-204ENST00000397790 3453 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 CRCP-204ENST00000398684 492 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 RNMTL1P1-201ENST00000454103 560 ntBASIC15.14■□□□□ 0.01
CD248Q9HCU0 PARP8-218ENST00000513738 596 ntTSL 4 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 TMUB2-201ENST00000319511 2418 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.14■□□□□ 0.01
CD248Q9HCU0 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CD248Q9HCU0 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 IFT57-201ENST00000264538 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC068760.1-201ENST00000493579 1953 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 SLC38A5-213ENST00000620913 1993 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC013355.1-201ENST00000562625 723 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 COG4-212ENST00000564653 590 ntTSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 RN7SL574P-201ENST00000581512 297 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC106818.1-201ENST00000623223 3242 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 PCBP2-OT1-201ENST00000634357 590 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC068587.8-201ENST00000641239 219 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC004923.1-202ENST00000642106 209 ntBASIC15.13■□□□□ 0.01
CD248Q9HCU0 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 KIFC3-211ENST00000562903 3221 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 CAMKV-215ENST00000488336 2905 ntTSL 2 BASIC15.13■□□□□ 0.01
CD248Q9HCU0 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CD248Q9HCU0 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms