Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 LINC01494-201ENST00000419511 1011 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 TGFA-206ENST00000445399 812 ntAPPRIS ALT1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 RASGRF2-AS1-202ENST00000505694 535 ntTSL 3 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 RPL30-213ENST00000523172 274 ntTSL 5 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 AC032044.1-201ENST00000570924 570 ntTSL 4 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 CYP4F10P-201ENST00000589560 752 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 ZNF677-207ENST00000598806 701 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 AC073592.10-201ENST00000624789 597 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 AC040160.2-201ENST00000623816 1675 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 KRT18P45-201ENST00000515347 1333 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 SMCR2-201ENST00000456090 564 ntTSL 2 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 KCNE3-202ENST00000525550 935 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 KRT18P8-201ENST00000581937 1246 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 PSME3-213ENST00000592169 826 ntTSL 3 BASIC22.6■■□□□ 1.21
IFT140Q96RY7 AL109983.1-201ENST00000603234 646 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 AC009779.7-201ENST00000609031 469 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 MIR6819-201ENST00000622122 61 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
IFT140Q96RY7 AF013593.1-201ENST00000458074 1487 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 RCC2P5-201ENST00000492126 1487 ntBASIC22.6■■□□□ 1.21
IFT140Q96RY7 MYB-242ENST00000618728 3545 ntTSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 AC111188.1-201ENST00000525758 1833 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 AC012358.2-201ENST00000430010 1434 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 HAO1-201ENST00000378789 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 TPM3P7-201ENST00000338274 732 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 AL121949.1-201ENST00000402043 968 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 GAPDHP29-201ENST00000429913 985 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 CHCHD2P6-201ENST00000454346 447 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 RN7SL340P-201ENST00000470792 296 ntBASIC22.59■■□□□ 1.21
IFT140Q96RY7 STEAP2-AS1-202ENST00000478318 627 ntTSL 3 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 AC044802.2-201ENST00000551187 434 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 TEX38-204ENST00000564373 637 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 MED11-203ENST00000575284 652 ntTSL 3 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
IFT140Q96RY7 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC22.59■■□□□ 1.21
IFT140Q96RY7 EPM2A-218ENST00000639465 2203 ntTSL 5 BASIC22.58■■□□□ 1.21
IFT140Q96RY7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
IFT140Q96RY7 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
IFT140Q96RY7 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC22.58■■□□□ 1.21
IFT140Q96RY7 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC22.58■■□□□ 1.21
IFT140Q96RY7 OS9-207ENST00000439210 1946 ntTSL 2 BASIC22.58■■□□□ 1.21
IFT140Q96RY7 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
IFT140Q96RY7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC22.58■■□□□ 1.21
IFT140Q96RY7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 ZNF684-201ENST00000372696 1009 ntTSL 3 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
IFT140Q96RY7 OR7E122P-201ENST00000383606 1017 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AL049792.1-201ENST00000424708 1262 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 HLA-DQB3-203ENST00000425319 356 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC009517.1-201ENST00000454750 570 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC012100.1-201ENST00000470304 282 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 SAA2-206ENST00000530400 323 ntTSL 3 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC112694.1-202ENST00000540985 943 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC027279.2-201ENST00000561938 793 ntTSL 5 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 NAA38-204ENST00000575208 529 ntTSL 3 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC008982.1-201ENST00000594769 963 ntAPPRIS P1 TSL 5 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 Metazoa_SRP.47-201ENST00000616942 279 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC010601.2-201ENST00000623060 774 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC010335.3-201ENST00000623767 531 ntBASIC22.58■■□□□ 1.2
IFT140Q96RY7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
IFT140Q96RY7 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
IFT140Q96RY7 AC018904.2-201ENST00000561202 1757 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
IFT140Q96RY7 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
IFT140Q96RY7 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
IFT140Q96RY7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
IFT140Q96RY7 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
IFT140Q96RY7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 194.2 ms