Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
ATP2A3Q93084 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC15.13■□□□□ 0.01
ATP2A3Q93084 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 MTMR3-204ENST00000401950 6018 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CXorf36-201ENST00000377934 2513 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 TBC1D3J-201ENST00000620719 1426 ntBASIC15.12■□□□□ 0.01
ATP2A3Q93084 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SPAG11A-203ENST00000351436 534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SPAG11B-204ENST00000361111 534 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 UFM1-202ENST00000379649 846 ntTSL 4 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC019193.1-201ENST00000506678 823 ntBASIC15.12■□□□□ 0.01
ATP2A3Q93084 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SPCS2P2-201ENST00000603270 608 ntBASIC15.12■□□□□ 0.01
ATP2A3Q93084 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 RAN-210ENST00000541630 1475 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 STK26-204ENST00000481105 1835 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 CEMIP-202ENST00000356249 7297 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 MRPL37P1-201ENST00000592451 1337 ntBASIC15.12■□□□□ 0.01
ATP2A3Q93084 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 C1R-201ENST00000535233 2211 ntTSL 2 BASIC15.12■□□□□ 0.01
ATP2A3Q93084 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
ATP2A3Q93084 SLC27A3-201ENST00000271857 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
ATP2A3Q93084 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC15.11■□□□□ 0.01
ATP2A3Q93084 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 HNRNPA1P27-201ENST00000412087 955 ntBASIC15.11■□□□□ 0.01
ATP2A3Q93084 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC15.11■□□□□ 0.01
ATP2A3Q93084 RN7SL258P-201ENST00000478664 300 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms