Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 KRT18P8-201ENST00000581937 1246 ntBASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 AC067750.1-201ENST00000608826 6545 ntBASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
SMARCC2Q8TAQ2 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 TDRD12-202ENST00000444215 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AL157791.1-201ENST00000553667 1699 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 STK3-218ENST00000617590 2485 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 JTB-202ENST00000356648 1040 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 RN7SKP214-201ENST00000364208 315 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SLC25A24P2-201ENST00000415059 510 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AC092580.1-201ENST00000433998 658 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 IGHJ2P-201ENST00000454480 60 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 RN7SL11P-201ENST00000471305 293 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 RN7SL774P-201ENST00000577467 290 ntBASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SELENOV-202ENST00000423711 1701 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 APP-205ENST00000358918 2366 ntTSL 5 BASIC16.69■□□□□ 0.26
SMARCC2Q8TAQ2 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC046130.1-201ENST00000501954 2179 ntTSL 5 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 XBP1P1-201ENST00000436573 652 ntBASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 Z97180.1-201ENST00000445173 988 ntBASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AL591471.1-201ENST00000621855 229 ntBASIC16.68■□□□□ 0.26
SMARCC2Q8TAQ2 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 79.3 ms