Protein–RNA interactions for Protein: Q8NHG7

SVIP, Small VCP/p97-interacting protein, humanhuman

Predictions only

Length 77 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SVIPQ8NHG7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 GINS3-201ENST00000318129 2274 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AP005131.6-201ENST00000587344 4215 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 NPIPB7-202ENST00000452313 1406 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 LRTOMT-202ENST00000307198 3604 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 KDF1-202ENST00000616918 1651 ntTSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AC019330.1-201ENST00000637390 1692 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SMUG1-220ENST00000513838 2119 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 TMEM150A-201ENST00000306353 1484 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 ZAR1-201ENST00000327939 1460 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 FOXL2NB-201ENST00000383165 3538 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SVIL-203ENST00000375400 6729 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 FAM239B-202ENST00000424415 2194 ntTSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 BICRAL-203ENST00000614467 6510 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 PLXNA2-201ENST00000367033 11444 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 RFC3-201ENST00000380071 2402 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 HNRNPDL-204ENST00000507721 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 C4orf22-201ENST00000358105 895 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 USF1-201ENST00000368019 998 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AL121892.1-201ENST00000422574 833 ntTSL 3 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 FAM8A3P-201ENST00000427218 844 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 MTND4LP12-201ENST00000448237 295 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AL137024.1-201ENST00000451100 728 ntTSL 3 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 LINC01524-202ENST00000454600 745 ntTSL 3 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AC010307.2-202ENST00000502776 570 ntTSL 4 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 HNRNPCP3-201ENST00000560385 875 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AL662799.1-202ENST00000614205 422 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AP003400.4-201ENST00000623832 399 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 RGS7-201ENST00000348120 1980 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 STAG1-210ENST00000629124 4322 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 MC1R-203ENST00000555427 3637 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SERPINA5-208ENST00000554866 2211 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 MYOZ3-201ENST00000297130 3445 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CREB3L4-205ENST00000368607 1752 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AC005072.1-201ENST00000606640 1779 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 ANKRD36-201ENST00000420699 6269 ntAPPRIS P2 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AL031846.2-201ENST00000624656 3671 ntBASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SLC35F1-201ENST00000360388 4852 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 TRAF3IP2-201ENST00000340026 2785 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SORBS1-208ENST00000371241 2055 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SLC9A1-201ENST00000263980 4516 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SH3BP2-201ENST00000356331 9211 ntAPPRIS P3 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 IFT80-201ENST00000326448 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 RGS3-204ENST00000350696 4387 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 KATNAL2-202ENST00000356157 1635 ntAPPRIS ALT2 TSL 5 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 CHMP3-204ENST00000409727 1851 ntTSL 2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 PCDHGA11-203ENST00000622044 3633 ntAPPRIS ALT2 BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 SNRNP48-201ENST00000342415 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SVIPQ8NHG7 LINC02125-201ENST00000512279 2198 ntTSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 GALNT11-208ENST00000434507 2747 ntAPPRIS P1 TSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 NPNT-202ENST00000379987 4598 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 AC124045.1-201ENST00000606008 1953 ntBASIC8.46□□□□□ -1.05
SVIPQ8NHG7 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 AC007365.3-202ENST00000417695 1722 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 MPI-208ENST00000563786 1707 ntTSL 5 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 TIAM2-210ENST00000528391 3349 ntTSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 AL138889.1-202ENST00000451317 3630 ntTSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 IL1RAP-207ENST00000422485 2048 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 CLTC-202ENST00000393043 5292 ntTSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 SPATS2L-206ENST00000409385 2320 ntTSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 GAB4-201ENST00000400588 2630 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 PCDHGB5-201ENST00000617380 4578 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.05
SVIPQ8NHG7 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 TMEM101-205ENST00000589334 1830 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 ITPRIP-202ENST00000337478 4093 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 PRAC2-201ENST00000422730 577 ntAPPRIS ALT2 TSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 AC244453.1-201ENST00000427872 494 ntTSL 3 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 AL022324.1-201ENST00000433457 663 ntBASIC8.46□□□□□ -1.06
SVIPQ8NHG7 SERBP1P2-201ENST00000436888 1164 ntBASIC8.46□□□□□ -1.06
SVIPQ8NHG7 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 SEC22A-207ENST00000481965 673 ntTSL 3 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 EMC4-208ENST00000559078 599 ntTSL 3 BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 APOC1P1-204ENST00000575148 560 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
SVIPQ8NHG7 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC8.46□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 220 ms