Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
BEST2Q8NFU1 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 GOLGA8VP-201ENST00000559009 1798 ntBASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AMT-256ENST00000638063 1783 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 BX679664.3-201ENST00000414070 555 ntBASIC15.32■□□□□ 0.04
BEST2Q8NFU1 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AC113935.1-201ENST00000471722 555 ntBASIC15.32■□□□□ 0.04
BEST2Q8NFU1 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 NEU3-205ENST00000531619 582 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
BEST2Q8NFU1 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AC005740.1-201ENST00000515639 522 ntBASIC15.31■□□□□ 0.04
BEST2Q8NFU1 LY6E-208ENST00000520531 490 ntTSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 CMC2-204ENST00000562713 573 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 CMC2-209ENST00000565108 399 ntTSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 NDUFB10P1-201ENST00000567319 521 ntBASIC15.31■□□□□ 0.04
BEST2Q8NFU1 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 NAT9-224ENST00000583757 583 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AL021707.6-201ENST00000609212 491 ntBASIC15.31■□□□□ 0.04
BEST2Q8NFU1 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.31■□□□□ 0.04
BEST2Q8NFU1 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 AC016397.2-201ENST00000624848 1985 ntBASIC15.31■□□□□ 0.04
BEST2Q8NFU1 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
BEST2Q8NFU1 CCDC180-210ENST00000529487 5242 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
BEST2Q8NFU1 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms